Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7 122 2e-22 seq14 114 3e-20 >seq7 Length=46052510 Score = 122 bits (134), Expect = 2e-22 Identities = 168/233 (72%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||||| ||| || |||||||| || || ||||| ||||||||||| |||| | || Sbjct 22020283 CCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGT 22020224 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || ||||| ||||| || | ||||||||| | | || || Sbjct 22020223 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCC 22020164 Query 152003 TTCCTT-TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 ||||| | || | || || || ||| |||| | | |||| ||| || || | Sbjct 22020163 CTCCTTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGA 22020104 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA--TTTTACCCT 152112 | || || || ||||| ||||| ||||||||||||| ||||| ||||| ||| Sbjct 22020103 GGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTTTTAACCT 22020051 Score = 122 bits (134), Expect = 2e-22 Identities = 161/222 (73%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||||| ||| || || ||||| || |||||||| ||||||||||| |||| | || Sbjct 22020510 CCTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGT 22020451 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || ||| | ||||| || | ||||||||| | | ||| || Sbjct 22020450 GCGGCCATCTTCCAGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 22020392 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || || ||| |||| | | |||| ||| || || || Sbjct 22020391 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAG 22020332 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||| ||||||||||||| |||||| Sbjct 22020331 GGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 116 bits (128), Expect = 9e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||||| ||| || |||||| | || || ||||| ||||||||||| |||| | || Sbjct 22020738 CCTGAGTCGGAGCACCAGATGAGG-GTGGATTCTTTCTGGATGTTGTAGTCGGAAGAGGT 22020680 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGG-TCCGCCGAGATTC 152001 | |||||||| || || ||||| ||||| || | ||||||| || | | ||| | Sbjct 22020679 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGC 22020620 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 | ||||| || || || || || ||| |||| | | |||| ||| || || | Sbjct 22020619 CCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGA 22020560 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || ||||| ||||| ||||||||||||| |||||| Sbjct 22020559 GGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020517 Score = 116 bits (128), Expect = 9e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||||| ||| || |||||||| || || ||||| ||||||||||| |||| | || Sbjct 22020966 CCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGT 22020907 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTG-GTCCGCCGAGATTC 152001 | |||||||| || || ||||| ||||| || | |||||| ||| | | ||| | Sbjct 22020906 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGC 22020847 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 | ||||| || || || || || ||| |||| | | |||| ||| || || | Sbjct 22020846 CCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGA 22020787 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || ||||| ||||| ||| ||||||||| |||||| Sbjct 22020786 GGGTGATGGTCTTGCCTGTGAGGGTC-TCACGAAGATCTGCAT 22020745 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||||| ||| || |||||||| || || ||||| ||||||||||| |||| | || Sbjct 22021194 CCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGT 22021135 Query 151943 TC-TCCCATCTTCTAGGCTTTTCCCGG-CGAAGATAAGCCTCTGCTGGTCCGCCGAG-AT 151999 | |||||||| || || |||| | ||||| || | ||||| ||| | | | || Sbjct 22021134 GCGGGCCATCTTC-AGCTGCTTGCCGGCCAAAGATCAGACGCTGCT-GTCTGGGGGGAAT 22021077 Query 152000 TCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTC 152059 || ||||| || || || || || ||| |||| | | |||| ||| || || Sbjct 22021076 GCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTC 22021017 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | | |||| ||||| ||||||||||||| |||||| Sbjct 22021016 GAGGGTGAT-GGTCTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020973 >seq14 Length=34043612 Score = 114 bits (126), Expect = 3e-20 Identities = 165/229 (72%), Gaps = 9/229 (4%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAG-ACTCTTTTTGGATGTTGTAATCGGCTAAAG 151941 ||| || | ||| || || ||||| || | |||| || ||||||||||| |||| | | Sbjct 21660198 CCTCAGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGG 21660139 Query 151942 TTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | | |||||||| || || ||||||||||| || | ||||||||| | | ||| | Sbjct 21660138 TGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGC 21660079 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTT 152058 | ||||| || || | ||||| |||||| |||| | | |||| ||| ||| || | Sbjct 21660078 CCTCCTTGTCCTGGA--TTTTGCTTGACATTCTCGATGGTGTC---ACTGGGCTCAACCT 21660024 Query 152059 CAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || || || ||||| || || ||||| || |||| |||||| || Sbjct 21660023 CCAGGGTGATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCATCTT 21659975 Score = 109 bits (120), Expect = 1e-18 Identities = 162/226 (72%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || ||||| || ||||| || ||||||||||| |||| | || Sbjct 21660423 CCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 21660364 Query 151943 TCTCCCATCTTCTAGGCT-TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | ||||||| ||| ||| ||||||||||| || | ||||||||| | | ||| | Sbjct 21660363 GCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGC 21660304 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTT 152058 || |||| || || || || |||||| |||| | | |||| ||| ||| || | Sbjct 21660303 CTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCAACCT 21660247 Query 152059 CAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || || || || |||||||| |||| |||||| Sbjct 21660246 C-AGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 Score = 105 bits (116), Expect = 2e-17 Identities = 162/226 (72%), Gaps = 9/226 (4%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || ||||| || ||||| || ||||||||||| |||| | || Sbjct 21660650 CCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 21660591 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || ||||||||||| || | ||||||||| | | ||| || Sbjct 21660590 GCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTG-GGGGATGCC 21660532 Query 152003 TTCCTTTTCTTGAAT-TTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTT 152058 ||||| || || || || ||||||| |||| | | |||| ||| ||| || | Sbjct 21660531 CTCCTTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTC---ACTGGGCTCAACCT 21660475 Query 152059 CAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || || || || |||||||| |||| |||||| Sbjct 21660474 C-AGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660430 Score = 105 bits (116), Expect = 2e-17 Identities = 161/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTT-GTAATCGGCTAAAG 151941 ||| || | ||| || || ||||| || ||||| || |||||||| ||| |||| | | Sbjct 21660878 CCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGG 21660819 Query 151942 TTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | | |||||||| || || ||||||||||| || | ||||||||| | | ||| | Sbjct 21660818 TGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGC 21660759 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTC 152059 | ||||| || || || ||| |||||| |||| | | ||| ||| ||| | | || Sbjct 21660758 CCTCCTTGTC-TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCAC--CCTC 21660702 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || || || |||||||| |||| |||||| Sbjct 21660701 CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153805735787749