Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7 149 5e-31 seq14 143 2e-29 >seq7 Length=46052510 Score = 149 bits (164), Expect = 5e-31 Identities = 173/232 (75%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || |||| | |||||||||||| ||| ||| || ||||||||||| || Sbjct 22020519 CATGCCGCCCCTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTC 22020460 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || ||||||||||| ||| ||||||||| ||||||||| |||| Sbjct 22020459 GGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGG 22020401 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||||| | | ||||||||| | || Sbjct 22020400 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTC 22020341 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | || || ||||| || |||||||||||||||||||| |||||| Sbjct 22020340 GACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020289 Score = 145 bits (160), Expect = 5e-30 Identities = 172/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || |||| | |||||| ||||| ||| || || ||||||||||| || Sbjct 22020292 CATGCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTC 22020233 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || ||||||||||| ||||||||||||| ||||||||| |||| Sbjct 22020232 GGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGG 22020173 Query 44227 AGGCACACCTTCCTTTTCC-GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | || ||||| ||| | ||||| ||||| | | ||||||||| | | Sbjct 22020172 GGGAATGCCCTCCTTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCT 22020113 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | || || ||||| || |||||||||||||||||||| ||||| Sbjct 22020112 CGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || |||| | |||||| ||||| ||| || || ||||||||||| || Sbjct 22020975 CATGCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTC 22020916 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG-ATCTG 44225 || || ||| | || ||||||||||| ||||||||||||| ||||||||| |||| Sbjct 22020915 GGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTG 22020856 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||||| | | ||||||||| | | Sbjct 22020855 GGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCT 22020796 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| | || || ||||| || ||||||||| |||||||||| |||||| Sbjct 22020795 CGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC-TCACGAAGATCTGCATG 22020744 Score = 132 bits (146), Expect = 3e-26 Identities = 173/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || |||| | |||||| ||| | ||| || || ||||||||||| || Sbjct 22020747 CATGCCGCCCCTGAGTCGGAGCACCAGATGAGG-GTGGATTCTTTCTGGATGTTGTAGTC 22020689 Query 44167 GGC-GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA-TCT 44224 || ||| || || | || ||||||||||| ||||||||||||| ||||||||| ||| Sbjct 22020688 GGAAGAGGTGCGGC-CATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCT 22020630 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | || ||||| ||| ||||| ||||| | | ||||||||| | Sbjct 22020629 GGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGC 22020570 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||| | || || ||||| || |||||||||||||||||||| |||||| Sbjct 22020569 TCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020516 Score = 114 bits (126), Expect = 9e-21 Identities = 173/239 (72%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || || |||| | |||||| ||||| ||| || || ||||||||||| Sbjct 22021206 TTACATGCCACCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTA 22021147 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTC--CAGCTGCTTCCCGG-CAAAGATCAAACGCTGCTG 44220 |||| || || || | | || ||||||||| |||| ||||||||| ||||||||| Sbjct 22021146 GTCGGAAAG--GGTGCGGGCCATCTTCAGCTGCTTGCCGGCCAAAGATCAGACGCTGCTG 22021089 Query 44221 ATCT-GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGG 44279 ||| | || | || ||||| ||| ||||| ||||| | | ||||||||| Sbjct 22021088 -TCTGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGC 22021030 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||| | || || ||| | || |||||||||||||||||||| |||||| Sbjct 22021029 TTGGCTCGACCTCGAGGGTGATGGTC-TGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020972 >seq14 Length=34043612 Score = 143 bits (158), Expect = 2e-29 Identities = 174/233 (75%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | | |||||||||||| ||| |||||| ||||||||||| || Sbjct 21660659 CATGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 21660600 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| ||||| ||||||| ||||||||| |||| Sbjct 21660599 GGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTG- 21660541 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||| | ||| | |||||||| || | Sbjct 21660540 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCT 21660481 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | |||| || || || ||||| || || ||||||||||| ||||| |||||| Sbjct 21660480 CAACCT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660429 Score = 141 bits (156), Expect = 7e-29 Identities = 175/234 (75%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT-GTAAT 44165 ||| || || ||||| | | |||||||||||| ||| |||||| |||||||| ||| | Sbjct 21660887 CATGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGT 21660828 Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 ||| ||| ||| | || ||||||||||| ||||| ||||||| ||||||||| |||| Sbjct 21660827 CGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTG 21660768 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 || | || ||||| || | ||||| ||| | | ||| | |||||||| || Sbjct 21660767 GGGGGATGCCCTCCTTGTCTG-GATCTT-TGCCTTGACATTCTCGATGGTGTCACTGGGC 21660710 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||| || || ||||| || || ||||||||||| ||||| |||||| Sbjct 21660709 TCACCCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660656 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | | |||||||||||| ||| |||||| ||||||||||| || Sbjct 21660432 CATGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 21660373 Query 44167 GGCGAGTTGGCGCTCGTC-GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 || ||| ||| | || |||||||| || ||||| ||||||| ||||||||| |||| Sbjct 21660372 GGAGAGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTG 21660313 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | ||| |||| ||| ||||| ||| | | | |||||||| || | Sbjct 21660312 GGGGGATGCCTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCT 21660253 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | |||| || || || ||||| || || ||||||||||| ||||| |||||| Sbjct 21660252 CAACCT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660201 Score = 132 bits (146), Expect = 3e-26 Identities = 164/222 (74%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 44117 CTCAGTCTCAACACCAGGTGAAGCGTGCT-CTCCTTTTGGATGTTGTAATCGGCGAGTTG 44175 ||||| | | |||||||||||| ||| |||||| ||||||||||| |||| ||| Sbjct 21660197 CTCAGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 21660138 Query 44176 GCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACC 44235 ||| | || ||||||||||| ||||| ||||||| ||||||||| |||| || | || Sbjct 21660137 GCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 21660078 Query 44236 TTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCAC 44295 ||||| ||| | || ||||| | | | |||||||| || || ||||||| Sbjct 21660077 CTCCTTGTCC--TGGATTTTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAG 21660020 Query 44296 CGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| || || |||||||| || ||||| ||||| Sbjct 21660019 GGTGATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCAT 21659978 Score = 105 bits (116), Expect = 5e-18 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| ||| |||||| ||||||||||| |||| ||| ||| | || || Sbjct 21661092 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTC 21661033 Query 44188 CA-GCTGCTTCCCGGCAAAGATCAAACGCTGCT--GATCTGAAGGCACACCTTCCTTTTC 44244 | |||| | | ||| ||||||| |||||||| | |||| || | ||| |||| || Sbjct 21661032 CCCGCTGTTGC--GGCGAAGATCAGACGCTGCTTGGGTCTGGGGG-ATGCCTCCCTTGTC 21660976 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | |||| | || || | | |||||||| || || ||||||| || || || Sbjct 21660975 CTGGATCTGC--CTGGAACTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 21660918 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || ||||||||||| ||||| |||||| Sbjct 21660917 CTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985929256723