Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7 163 7e-35 seq14 134 3e-26 >seq7 Length=46052510 Score = 163 bits (180), Expect = 7e-35 Identities = 193/256 (75%), Gaps = 9/256 (4%) Strand=Plus/Plus Query 177891 TTAAGAAATA-TATAAAGTAAGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGG 177949 |||| || || |||| | ||||||||| | | || || |||||||| || |||||||| Sbjct 22020031 TTAACAATTAGTATATTTTCAGGTTAAAA-GATGCAGATCTTCGTGAAGACCCTCACAGG 22020089 Query 177950 AAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCATCGAGAACGTCAAACAAAA 178006 || || |||||||||||||| || |||| |||||||| ||||| || || || Sbjct 22020090 CAAGACCATCACCCTCGAGGTCGAGCCAAGC---GACACCATTGAGAATGTGAAGGCCAA 22020146 Query 178007 GAT-TCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 ||| |||||||| || || || || || |||||||| || || ||||| ||||| || | Sbjct 22020147 GATGCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTGATCTTTGCCGGCAAGC 22020206 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATC 178125 |||| |||||||| | || ||| |||| || ||| |||| |||||||| || || |||| Sbjct 22020207 AGCTGGAAGATGGCCGCACCCTTTCCGACTACAACATCCAGAAAGAATCCACCCTTCATC 22020266 Query 178126 TTGTTTTGAGACTCAG 178141 | || | ||||||| Sbjct 22020267 TGGTGCTCCGACTCAG 22020282 Score = 150 bits (166), Expect = 4e-31 Identities = 171/223 (77%), Gaps = 10/223 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || |||||||| || |||||||| || || |||||||||||||| || |||| Sbjct 22020520 CAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC--- 22020576 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGA-CCA 178039 |||||||| ||||| || || ||||| |||||||| || || ||||| || || ||| Sbjct 22020577 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCCA 22020636 Query 178040 GCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA-CTCTTGCCGATTATA 178098 ||| || || ||||| ||||| || ||||| |||||||| | | ||||| |||| || | Sbjct 22020637 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCTCTT-CCGACTACA 22020695 Query 178099 ACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || |||| |||||||| || || ||||| || | ||||||| Sbjct 22020696 ACATCCAGAAAGAATCCACCCT-CATCTGGTGCTCCGACTCAG 22020737 Score = 150 bits (166), Expect = 4e-31 Identities = 169/222 (76%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || ||||||| | | |||||||| || || |||||||||||||| || |||| Sbjct 22020748 CAGATCTTCGTGAGACC-CTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC--- 22020803 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGAC-CA 178039 |||||||| ||||| || || ||||| |||||||| || || ||||| || ||| || Sbjct 22020804 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACGCA 22020863 Query 178040 GCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 ||| || || ||||| ||||| || ||||| |||||||| | || ||| |||| || || Sbjct 22020864 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAA 22020923 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 | |||| |||||||| || || ||||| || | ||||||| Sbjct 22020924 CATCCAGAAAGAATCCACCCTTCATCTGGTGCTCCGACTCAG 22020965 Score = 149 bits (164), Expect = 2e-30 Identities = 167/221 (76%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || |||||||| || |||||||| || || |||||||||||||| || |||| Sbjct 22020293 CAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC--- 22020349 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| ||||| || || ||||| |||||||| || || ||||| || |||||| Sbjct 22020350 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 22020409 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| | ||| || ||||| |||||||| | || ||| |||| || ||| Sbjct 22020410 CAGCGTCTGATCTTTG-CGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAAC 22020468 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 |||| ||||| || || || || || || | ||||||| Sbjct 22020469 ATCCAGAAAGAGTCCACCCTTCACCTGGTGCTCCGACTCAG 22020509 Score = 127 bits (140), Expect = 5e-24 Identities = 168/224 (75%), Gaps = 12/224 (5%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || |||||||| || |||||||| | | | |||||||||||||| || |||| Sbjct 22020976 CAGATCTTCGTGAAGACCCTCACAGGCAGACC-ATCACCCTCGAGGTCGAGCCAAGC--- 22021031 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG-AATCCCTCCGGACCA 178039 |||||||| ||||| || || ||||| |||||||| || || | |||| || || || Sbjct 22021032 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCAGA-CA 22021090 Query 178040 GCAACGACTTATC-TTCGCCGGAAAACAGCTCGAAGATGG-AAGGACTCTTGCCGATTAT 178097 ||| || || ||| || ||||| || ||||| |||||||| | || ||| |||| || Sbjct 22021091 GCAGCGTCTGATCTTTGGCCGGCAAGCAGCT-GAAGATGGCCCGCACCCTTTCCGACTAC 22021149 Query 178098 AACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 ||| |||| |||||||| || || ||||| || | ||||||| Sbjct 22021150 AACATCCAGAAAGAATCCACCCTTCATCTGGTGCTCCGACTCAG 22021193 >seq14 Length=34043612 Score = 134 bits (148), Expect = 3e-26 Identities = 158/209 (76%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || || || || || |||||||| ||||| || || ||| Sbjct 21660205 CAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCT-GAGGTTGA--GCCCAGTG 21660261 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| ||||| |||||||| | ||| ||||| || ||||||| Sbjct 21660262 ACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGGAGGCATCCCCCCAGACCAGC 21660321 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCG-AAGATGGAAGGACTCTTGCCGATTATAAC 178100 | || || ||||||||||| |||||||| | ||||||| | || || |||| || ||| Sbjct 21660322 AGCGTCTGATCTTCGCCGGCAAACAGCTGGAAAGATGGTCGCACCCTCTCCGACTACAAC 21660381 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 21660382 ATCCAGAAGGAGTCCACCCTTCACCTGGT 21660410 Score = 132 bits (146), Expect = 1e-25 Identities = 147/193 (76%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || || || || || || || || || |||||||| ||||| || || ||| Sbjct 21659981 CAGATCTTTGTAAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGA--GCCCAGTG 21660038 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| ||||| | |||||||| || || ||||| || ||||||| Sbjct 21660039 ACACCATCGAGAATGTCAAGCAAAA--TCCAGGACAAGGAGGGCATCCCCCCAGACCAGC 21660096 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||||||||| || ||||| |||||||| | || || |||| || ||| Sbjct 21660097 AGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAACA 21660156 Query 178102 TCCAAAAAGAATC 178114 |||| || || || Sbjct 21660157 TCCAGAAGGAGTC 21660169 Score = 131 bits (144), Expect = 4e-25 Identities = 158/209 (76%), Gaps = 7/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || || || || || |||||||| ||||| || || ||| Sbjct 21660433 CAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCT-GAGGTTGA--GCCCAGTG 21660489 Query 177982 ACACCATCGAGAACGTCAAACAA-AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||||| |||||| ||||| |||||||| || || ||||| || |||||| Sbjct 21660490 ACACCATCGAGAATGTCAAAGGCCAAGATCCAGGACAAGGAGGGCATCCC-CCAGACCAG 21660548 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||||||||| || ||||| |||||||| | || || |||| || ||| Sbjct 21660549 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAC 21660608 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 21660609 ATCCAGAAGGAGTCCACCCTTCACCTGGT 21660637 Score = 125 bits (138), Expect = 2e-23 Identities = 156/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || || || || || |||||||| |||| || || ||| Sbjct 21660660 CAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCTGGAGGGTGA--GCCCAGTG 21660717 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| ||| |||| || || ||||| || ||||||| Sbjct 21660718 ACACCATCGAGAATGTCAAGGCAAAGATCCAG-ACAAGGAGGGCATCCCCCCAGACCAGC 21660776 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA-TAAC 178100 | || || ||||||||||| || ||||| |||||||| | || || |||| || ||| Sbjct 21660777 AGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAAC 21660836 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 21660837 ATCCAGAAGGAGTCCACCCTTCACCTGGT 21660865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715484160686