Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq14 159 3e-34 seq7 145 7e-30 >seq14 Length=34043612 Score = 159 bits (176), Expect = 3e-34 Identities = 170/222 (77%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCT-CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCG 41703 ||||| | |||||| || || ||| ||||||||| ||||| ||||||||||||||||| Sbjct 21660194 AGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 21660135 Query 41704 CTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTC 41763 | || || ||||||||||||||||| ||||| ||||| ||||| | ||| | || ||| Sbjct 21660134 ACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTC 21660075 Query 41764 CTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 ||||||| || |||||||| | | | ||||| || | ||| ||||||| || Sbjct 21660074 CTTGTCCTGGA--TTTTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGT 21660017 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || ||||| |||||||| || |||||||| || Sbjct 21660016 GATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCATCTT 21659975 Score = 147 bits (162), Expect = 2e-30 Identities = 167/220 (76%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||| || || ||| ||||||||| ||||| ||||||||||||||||| Sbjct 21660646 AGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGA 21660587 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||||||||| ||||| ||||| ||||| | ||| | || |||| Sbjct 21660586 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTG-GGGGATGCCCTCC 21660528 Query 41765 TTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| ||| || ||| || | | ||||| || | ||| |||| || || Sbjct 21660527 TTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCT-CAGGGT 21660469 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| ||||| || || ||||||||| Sbjct 21660468 GATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660429 Score = 147 bits (162), Expect = 2e-30 Identities = 166/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTA-TAGTCGGAGAGGGTGCG 41703 ||||| | |||||| || || ||| ||||||||| ||||| ||||||||||||||||| Sbjct 21660874 AGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCG 21660815 Query 41704 CTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTC 41763 | || || ||||||||||||||||| ||||| ||||| ||||| | ||| | || ||| Sbjct 21660814 ACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTC 21660755 Query 41764 CTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 ||||| | ||| ||| ||| | | | ||||| || | ||| |||||| || Sbjct 21660754 CTTGT-CTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGT 21660696 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| ||||| || || ||||||||| Sbjct 21660695 GATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660656 Score = 132 bits (146), Expect = 4e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||| || || ||| ||||||||| ||||| ||||||||||||||||| Sbjct 21660419 AGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGA 21660360 Query 41705 TCGTC-GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTC 41763 | || || ||||| ||||||||||| ||||| ||||| ||||| | ||| | || | Sbjct 21660359 CCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCTCC 21660300 Query 41764 CTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 ||||||| ||| || ||| | | | ||||| || | ||| |||| || || Sbjct 21660299 CTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCT-CAGGGT 21660241 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| ||||| || || ||||||||| Sbjct 21660240 GATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660201 Score = 120 bits (132), Expect = 3e-22 Identities = 170/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||| || || ||| ||||||||| ||||| |||||||| Sbjct 21661110 GCCACCACGGAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 21661051 Query 41695 GAGGGTGCGCTCGTCGT-CGAGCTGCTTGCCGGCGAATATCAGGCGCTG--TTGGTCCGC 41751 ||||||||| | || | | |||| ||| ||||||| ||||| ||||| | |||| | Sbjct 21661050 GAGGGTGCGACCATCTTCCCCGCTG-TTG-CGGCGAAGATCAGACGCTGCTTGGGTCTGG 21660993 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 |||| ||| |||||||| || | | || ||| | | ||||| || | ||| Sbjct 21660992 GGGATGCCTC-CCTTGTCCTGGA--TCTGCCTGGAACTTCTCAATGGTGTCACTGGGCTC 21660936 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || || || ||||| ||||| ||||| || || ||||||||| Sbjct 21660935 AACCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660884 >seq7 Length=46052510 Score = 145 bits (160), Expect = 7e-30 Identities = 172/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | ||||||||| || ||| || ||||| ||||| |||||||| Sbjct 22020289 GCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 22020230 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || |||||||||||||| || ||||| ||||| ||||| | ||| Sbjct 22020229 AAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGG 22020170 Query 41755 AACGCTCTCCTTGTCCATG-ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 || || |||||||||| | || || ||||| | | |||||||| | ||| | Sbjct 22020169 AATGCCCTCCTTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGA 22020110 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || || || || || || ||||| ||||| |||||||| || Sbjct 22020109 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 140 bits (154), Expect = 3e-28 Identities = 169/229 (74%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | |||||| || || ||| ||| ||||| ||||| |||||||| Sbjct 22020516 GCCGCCCCTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 22020457 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| || || ||||| ||||| ||||| | ||| Sbjct 22020456 AAGGGTGCGGCCATCTTCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGG 22020398 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||||| | | |||||||| | ||| || Sbjct 22020397 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGAC 22020338 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 22020337 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020289 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | ||||||||| || ||| || ||||| ||||| |||||||| Sbjct 22020972 GCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 22020913 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTG-GTCCGCGG 41753 |||||||| | || || |||||||||||||| || ||||| ||||| || ||| | || Sbjct 22020912 AAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGG 22020853 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | | || |||||||||| ||| || ||||| | | |||||||| | ||| | Sbjct 22020852 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGA 22020793 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || || || ||| | ||||| ||||||||| Sbjct 22020792 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC-TCACGAAGATCTGCATG 22020744 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | ||||||||| || ||| || ||||| ||||| |||||||| Sbjct 22020744 GCCGCCCCTGAGTCGGAGCACCAGATG-AGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 22020686 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTG-TTGGTCCGCGG 41753 |||||| | || || |||||||||||||| || ||||| ||||| | |||| | || Sbjct 22020685 AGAGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGG 22020626 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | | || |||||||||| ||| || ||||| | | |||||||| | ||| | Sbjct 22020625 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGA 22020566 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 22020565 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020516 Score = 109 bits (120), Expect = 5e-19 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | ||||||||| || ||| || ||||| ||||| |||||||| |||||||| Sbjct 22021190 AGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGG 22021131 Query 41705 TCG-TCGTCGAGCTGCTTGCCGG-CGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCT 41762 | || || ||||||||||||| | || ||||| ||||| || | ||||| || || Sbjct 22021130 GCCATCTTC-AGCTGCTTGCCGGCCAAAGATCAGACGCTGCTGTCTGGGGGGAATGCCCT 22021072 Query 41763 CCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCG 41822 |||||||| ||| || ||||| | | |||||||| | ||| ||||| | | Sbjct 22021071 CCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGG 22021012 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | | | || || || ||||| ||||| ||||||||| Sbjct 22021011 TGAT-GGTCTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298111402800