Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq297 89.7 4e-13 >seq297 Length=3848896 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 97123 TGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCC 97182 || |||||||| | || | || | |||||| || ||||||||||||||||| || ||| Sbjct 2866587 TGTGCGATCATGTAGGTGAGAAGGGCATAGCTGGCGATGTTAAAAGGCACCCCCAGGCCC 2866528 Query 97183 ATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGA 97242 || || || || | || || | ||||||||| |||| || || || || || ||||| Sbjct 2866527 ATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTCGCAGACGTAGAACTGG 2866468 Query 97243 CTCAATACATGACAGGGGGGCAACGCCAT 97271 | | | || |||||||||| ||||| Sbjct 2866467 CAGAGGGCGTGGCAGGGGGGCAGGGCCAT 2866439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346740974942600