Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq9955 96.9 3e-15 >seq9955 Length=1786201 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||||| ||||| ||||| | || || || ||||||| | || |||||| | Sbjct 4300 ACCATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 4241 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| |||| || ||| ||||| || || || || |||||| Sbjct 4240 AGCGACACCATTGAGAATGTGAAAGCTAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 4181 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || ||||| |||||||| | ||||||| ||||| || || ||| Sbjct 4180 CAGCAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTAC 4121 Query 25176 AATATTCAAAAAGAATCCACGCT 25198 | || || ||||||||||| || Sbjct 4120 ACCATCCAGAAAGAATCCACCCT 4098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433274237536700