Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 2e-11 >seq9 Length=798570 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCCACACAACGCCAACAG 108533 || ||| ||||||||||||| ||||| || || ||| || ||||| ||||||||| ||| Sbjct 342290 GACCACCGGGTTCACCACAAATACTCCGAGACAGAC-GCAGACCCCCACAACGCCGTCAG 342348 Query 108534 GGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGATC 108591 ||| |||| ||||| ||| | || ||||| || || ||| | |||||||| ||| Sbjct 342349 GGGCTTCTTCTTCTCTCACATCGGCTGGCTGCTGGTGCGCAAACATCCCGACGTCATC 342406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381725433925920