Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq9955 93.3 9e-14 >seq9955 Length=1786201 Score = 93.3 bits (102), Expect = 9e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||| | || ||||| ||||| || || |||| || | || || | |||||||| Sbjct 4089 ACCAGGCGGAGGGTGGATTCTTTCTGGATGGTGTAGTCAGACAGGGTGCGGCCATCTTCC 4148 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| || | || ||||| || || ||||| || ||||| || Sbjct 4149 AGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 4208 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || || |||||||||||||| ||||| || ||||| | ||||| Sbjct 4209 ATCTTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTG 4268 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 4269 CCAGTGAGGGTCTTGACAAAGATTTGCAT 4297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109336888928060