Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq51 84.2 2e-11 >seq51 Length=752366 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| || || || || | |||||| || | || | || ||||| || ||||| || | Sbjct 77555 CCTCATCCCTGCTAATGAGTTCATTGGAGTAGGTAAGGCCCGGCATGAGGCCTCTCTTCT 77614 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | |||| | || | ||||||||| ||||| ||||| || || || || |||||||||| Sbjct 77615 TCAGCCAGTAGATGGCAGCAAATGAGCCAGAGAAGAAGATCCCCTCCACAGCTGCAAAAG 77674 Query 19103 CAACTAGTC 19111 | || |||| Sbjct 77675 CCACAAGTC 77683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562037271655200