Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq10130 542 5e-149 seq9915 233 4e-56 seq9943 192 1e-43 seq10057 152 1e-31 seq9901 134 3e-26 seq10111 127 4e-24 seq9855 111 3e-19 seq348 102 2e-16 seq9909 100 5e-16 seq9988 98.7 2e-15 seq9854 98.7 2e-15 seq51 84.2 4e-11 >seq10130 Length=961328 Score = 542 bits (600), Expect = 5e-149 Identities = 1078/1576 (68%), Gaps = 58/1576 (4%) Strand=Plus/Minus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917 |||||||||| |||| || || | | |||| ||||| |||||||||||||| || Sbjct 296361 CATGTCCTCGCTCCACAGCCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGAT 296302 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || || ||||| |||| | ||| | ||| ||||||| ||||||| Sbjct 296301 CTGGAACTCGCCGGAGAGGACCCGGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGA 296242 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| ||||| ||||| || ||| ||| ||||||||||| |||| ||| || || Sbjct 296241 CTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATGGGGGCCAGCAGCAGGCT 296182 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCC----GAAGCTCTGCCCAGTCCCATCTGC 213093 ||||||||| |||||| | |||| | || | |||| ||||||||| Sbjct 296181 GTTCCTCACGCCGTGCCGGGCGATCTT-CTCCTTCAGCAGCTT---CCAGTCCCA----- 296131 Query 213094 CAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGG 213153 ||| ||| ||| ||| | ||||||||| |||| | | || ||| |||| Sbjct 296130 CAGGTCGGTGGGGGTC-TTCTC---CCACATGTCGTACTGGAGCACCCCCCGGCTGACGG 296075 Query 213154 GGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCA 213213 | ||||| ||| | ||||||||| ||||| |||||||||||| |||| || Sbjct 296074 GCGAGCCCTCGTACGTCTCGTAGGGGCCCAGCTCCGCCGCCAGCTCGCAGCTGGCCTCCA 296015 Query 213214 GGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACG 213273 | || |||| ||||||||| || || |||| ||||||| || ||||| | | | Sbjct 296014 GCGCGGCGTGGTAGATGGTCTCGAAGATCTGGACGTTGAGCAGCTGCGCCTCGGCGCTCT 295955 Query 213274 TGAA-GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATG 213332 ||| ||| | | ||| | ||| | || ||||| |||||||| |||||||||||| Sbjct 295954 CGAACGGGTAGCG-CATCAGGATGAAGGCGTCGGCCAGACCCTGGACGCCGATGCCGATG 295896 Query 213333 GGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGG------TAAAAGTTGCAG 213386 || | ||| | | ||| ||||| ||| || |||| || |||| Sbjct 295895 GGCCGGTGGCGCTTGTT------GGAGCGCTCGGCCTCGGGGACCGGGTAGTAGTTTATC 295842 Query 213387 TCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGA 213446 ||||||| |||||| ||||| | ||| |||||||| |||||| | || Sbjct 295841 TCGATGACCTTGTTCAGGTTCTTCACGATCACCTTGGTGACGGCGGCCAGCTTCT----- 295787 Query 213447 TTGAACACGTAGCCCCCGTCCTGCACAAACT-CAGGC--AGGGCGATGCTGGCCAGGTTG 213503 |||| || || || || || | | || | ||||||||| |||||||||| Sbjct 295786 -TGAAGTCGAAGGTCCGCTCGGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTG 295728 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 || ||||||||||| | | ||| |||||| | ||||||||| ||||||||||| Sbjct 295727 CAGACGGCCACCTCGTCCTTGCTGGTGAACTCCACCACCTCGGTGCAGAGGTTGCTGCAC 295668 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCAT 213622 |||||||||||||||||| ||||| ||| ||| | |||| |||||||||||||| Sbjct 295667 TTGATGGTGCCCAGGTTCTGCTGGTTGCTCTT-GCGGTTGCAGGCGTCCTTGTAGAGCAT 295609 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTT 213682 |||||| | |||||||| ||| ||| | | || | ||| || | | |||||| Sbjct 295608 GTAGGGCGTGCCGGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCTGCTGGGCCTT 295549 Query 213683 GACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATT 213741 |||||| | | || ||| | | |||||||||| | ||||||| | ||| | Sbjct 295548 CACCACCTTCTTCAC----CCGCCCCTCCGCCTCGTACTTTGTGTAGAGCGTCTCGAACT 295493 Query 213742 CGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCC 213801 | | |||||| | |||||| || ||||| ||||||||| ||| ||||||| Sbjct 295492 CCTCCCCCCAGCACTCGTCCAGGCCGGGACACTCGCTGGGACACATCAGGGACCAGTCCT 295433 Query 213802 CG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCC 213860 | | |||| || | | |||||||||||| |||| |||||| || ||| |||||| Sbjct 295432 GGTTGCTCTC-CACCCGCCTCATGAACAGGTCGGGGATCCACAGGCCGTAGAAGAGGTCC 295374 Query 213861 CTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCC 213920 |||| || | ||| ||| || | ||| || ||| || || ||||| || | ||| Sbjct 295373 CTGGCCCGCTGCTCCTCCTTGCCCGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCG 295314 Query 213921 GCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTC---TTGCCGCCCTGGTCC 213977 |||||||||||||| ||| ||||| |||||||| |||||| ||||||||||||||| Sbjct 295313 AAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGCCTCTTGTTGCCGCCCTGGTCC 295254 Query 213978 ACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCG 214037 || | ||| ||||| ||| ||||| | || ||||| |||||||| | ||| Sbjct 295253 ACGTAGCGGGCGGTGTTGTTGTAGACCCGCAGCATCGGCACCAGGCCGTTGGAGTTGCCG 295194 Query 214038 TTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCA 214097 ||||| || || || || ||| | | | | | ||||| | | || ||||| Sbjct 295193 TTGGTGCCGGCGATGTAGCTGCCCGTCGAGCGGATGCAGCTCACCGCCACGCCGATGCCG 295134 Query 214098 CCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTG 214157 ||||| |||||||||| | |||||| || | | || || |||||| | |||||| Sbjct 295133 CCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATGCTG 295074 Query 214158 TCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTG 214217 || || | | | ||||| ||||||||| || ||||| |||| | | ||| | |||| Sbjct 295073 TCGTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCGGCGTTG 295014 Query 214218 AAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGG 214277 || ||||| || ||| || | | |||| | || || || |||| ||||| | | Sbjct 295013 AAGAGCGTCGGCGAGGCGTGCGTGAACCACTTCTCCGACAGCAGGTTGTACGTCTCGATG 294954 Query 214278 ACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGG 214336 | | | |||||| | ||||||| | | ||| | ||| ||||||||||| || Sbjct 294953 GCGGCGTCGATGTCCCGGCCGTGGATCCCCACCG-ACACGCGCATGAGCATGTGCTGCGG 294895 Query 214337 CCTCTCTATGGGTCCTT--TGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAAC 214394 || ||| | |||| | | ||| |||||||||||||||||||| |||||||| Sbjct 294894 CCGCTC--GGCCACCTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAG 294837 Query 214395 CCAAAGTAGGAGTAGG 214410 || ||| || ||||| Sbjct 294836 CCGAAGAAGTTGTAGG 294821 >seq9915 Length=2167577 Score = 233 bits (258), Expect = 4e-56 Identities = 195/239 (82%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||||||||| || || |||| ||||||| ||||||||| ||||||||||| |||| Sbjct 1002507 GCTGACAGCCGCTGCTCACGTGCGTTAGGACCTTCTGTTTGAGCTGGGCCACCTGATCCC 1002566 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 |||| || ||||| || ||||| || || |||||||| ||| || ||||| || |||| Sbjct 1002567 GCAGCACCGACGCCGTGTTGGAAAGCCCCGCGTTGTCGTTCTTCAGAACCTTGACCTTCT 1002626 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 ||||||||||||||||||| ||||| |||||||| | ||| |||||||| || | |||| Sbjct 1002627 CCTCCAGCCGCGCGATGCGCTCCAGCTTGCGCCGCCTGCACTTGGTGGCGGCGAGTCGGT 1002686 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||| || | ||| || |||||||||||||| |||||| ||||| |||||| |||||| Sbjct 1002687 TCCGCAGCCGCTTGCGCTCCGCCTTGATGCGCTCCTGGGTCTCCAGGTCGATGGGAGAC 1002745 Score = 105 bits (116), Expect = 1e-17 Identities = 94/116 (81%), Gaps = 10/116 (9%) Strand=Plus/Plus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||| ||||||||| | |||||||| || ||||| || ||||| || ||||||| Sbjct 1002540 TCTGTTTGAGCTGGGCCACCTGATCCCGCAGCACCGACGCCGTGTTGGAAAGCCCCGCGT 1002599 Query 238986 TATC-------AGA--CTTGAGCATTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | || ||| ||||| | ||||||||||||||||||||||| |||||||| Sbjct 1002600 TGTCGTTCTTCAGAACCTTGACC-TTCTCCTCCAGCCGCGCGATGCGCTCCAGCTT 1002654 >seq9943 Length=4897111 Score = 192 bits (212), Expect = 1e-43 Identities = 171/214 (80%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 241414 CAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAG 241473 || ||| | ||||||||| ||||||||||| ||||| ||| |||||| || | ||||| Sbjct 1335502 CATGACTTTCTGTTTGAGCTGGGCCACCTGCTCCCGTAGACGGGACGCCGTGCTCGACAG 1335561 Query 241474 TCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAG 241533 || |||||||| | || ||||||||||| || |||||||| ||||||||||| ||||| Sbjct 1335562 CCCCGCGTTGTCCGTTTTCAGCACCTTCACCTTGTCCTCCAGACGCGCGATGCGCTCCAG 1335621 Query 241534 TTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTT 241593 ||||||| ||||| |||| || |||| ||||||| || | ||| || |||||||| Sbjct 1335622 CTTGCGCCTCCGGCACTTGGACGCCGCCAGCCGGTTCCTCAGCCGCTTGCGCTCCGCCTT 1335681 Query 241594 GATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||| || ||||||| ||||||||||| || ||| Sbjct 1335682 GATCCGCTCCTGGTTCTCCATGTCGAGGGGGGAC 1335715 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/115 (77%), Gaps = 8/115 (7%) Strand=Plus/Plus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||| ||||||||| | ||||| ||| |||||| || | ||||| ||||||| Sbjct 1335510 TCTGTTTGAGCTGGGCCACCTGCTCCCGTAGACGGGACGCCGTGCTCGACAGCCCCGCGT 1335569 Query 238986 TATCAGACTTGAGCA--------TTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | || | || |||| || |||||||| ||||||||||| |||||||| Sbjct 1335570 TGTCCGTTTTCAGCACCTTCACCTTGTCCTCCAGACGCGCGATGCGCTCCAGCTT 1335624 >seq10057 Length=1237155 Score = 152 bits (168), Expect = 1e-31 Identities = 176/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 241390 CTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCG 241449 ||| ||||| | | | ||| | || ||||| ||||||||| || || ||||| | ||| Sbjct 1106871 CTGGCAGCCGTTGGTTACGTGACTCATGACCTTCTGTTTGAGCTGAGCGACCTGCTGCCG 1106812 Query 241450 CAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTC 241509 ||| | | ||||| || ||| | | ||| | | ||| ||||||||||| ||||| Sbjct 1106811 CAGCATTGCAGCGGTGGAGGCCAGGTCCGAGTTCTGACTCTTCAGCACCTTCACCTTCTC 1106752 Query 241510 CTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTT 241569 ||| ||||||| || || ||||| || ||| ||||| |||| || || | |||||| Sbjct 1106751 CTCGAGCCGCGAAATTCGCTCCAGCTTCCGCTTCCGGCACTTGGACGCGGCGATGCGGTT 1106692 Query 241570 CCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 |||||| |||| ||||||||||||||||| ||||| ||||| |||||| || || Sbjct 1106691 TCGGAGTTTCTTGCGTTCCGCCTTGATGCGCTCCTGCGTCTCCAAGTCGATGGGGGA 1106635 >seq9901 Length=2316506 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||| || || ||||||||||| |||||||| | | ||||| | ||| | Sbjct 1695977 ACCTTCTGCTTCAGCTGGGCCACCTGCTCCCGCAGCAAGTTGGCGGTGGACGCCAGCTCG 1695918 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | |||||||| |||||| ||||||||||||| | ||| || ||||| || Sbjct 1695917 GAGTTCTGGGACTTGAGGGTCTTCACCTTCTCCTCCAGCCTGGAGATCCGCTCCAGCTTC 1695858 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | ||||| |||| |||||| | |||||||| | | ||| | |||||||||||| Sbjct 1695857 CTTTTCCGGCACTTGGAGGCTGCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATG 1695798 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || |||||| ||||||||||||||| || Sbjct 1695797 CGCTCCTGGCTCTCCATGTCGATCGGGGA 1695769 >seq10111 Length=995285 Score = 127 bits (140), Expect = 4e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || |||| ||| ||||| ||||||||||| || | ||| | | ||||| | ||| Sbjct 664956 AGCACCTTCTGCTTGAGCTGGGCCACCTGCTCTCTCAGCAGGCTGGCGGTGGACGCCAGG 665015 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | || ||| ||| |||||| || ||||||||||| | |||||| ||||| Sbjct 665016 TCGGTGTTCTGAGTCTTCAGCGTCTTCACCTTGTCCTCCAGCCGGGAGATGCGCTCCAGC 665075 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 |||||| | ||| |||| ||| || | |||||||||||| ||||| | || || ||| Sbjct 665076 TTGCGCTTCCTGCACTTGGAGGCGGCGATGCGGTTCCGGAGCCTCTTCCTCTCGGCTTTG 665135 Query 241595 ATGCGTTCCTGGTCCTCCATGTC 241617 ||||| ||||| |||||||| Sbjct 665136 ATGCGCTCCTGCGAGTCCATGTC 665158 >seq9855 Length=3379791 Score = 111 bits (122), Expect = 3e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 38960 CACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGT 39019 |||||||||||| | |||||| ||||| |||||||| || | |||||| |||||||| | Sbjct 3293385 CACCAGCTCCCAGCGGTTGGCAGAGAACAGCAGGTGCACCGTGTGGTCCTCCAGCTCGCT 3293326 Query 39020 CTTACTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTC 39070 ||| |||||||||| | |||||| | || ||||||||| ||| | ||||| Sbjct 3293325 CTTCTTCTCCAGGTAGGCGCTGATGAGCTGTCCGATGGTTGTGCTCCTGTC 3293275 >seq348 Length=361584 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | |||||||||| ||||| |||| || || ||||| | || |||| || Sbjct 109442 TCGTCTCTGCTGATGAGCTCGTTGCTGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 109501 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || || ||||| ||||| |||||||||||||||||||| || ||||| || Sbjct 109502 AGCCAGAAGATGGCGGCGAACGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAAGGC 109560 Score = 96.9 bits (106), Expect = 6e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||||| |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 94184 CTGGTACTCTCCCACTCGCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 94125 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||||||||| Sbjct 94124 CATGAAGTCGAAGGGGTT 94107 Score = 96.9 bits (106), Expect = 6e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||||| |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 108678 CTGGTACTCTCCCACTCGCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 108737 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||||||||| Sbjct 108738 CATGAAGTCGAAGGGGTT 108755 >seq9909 Length=2276304 Score = 100 bits (110), Expect = 5e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 213821 CATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCAC 213880 |||||| ||||| |||| |||||| | ||||||||| |||| |||| ||| || Sbjct 1377844 CATGAAGAGGTCTGGGATCCACAGGCCAAAGAACAGGTCTCTGGCCCTCTGCTCCTCTTT 1377785 Query 213881 TCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTA 213940 || | ||| || ||| || | ||| ||||| | ||| |||||||||||||||| ||| Sbjct 1377784 ACCGGTGTTCTTCTTCAGCTCCAAAAACTCAAACACGTCAGCGTGCCACGGCTCCAGGTA 1377725 Query 213941 GATGGCAAAGGCGCCCGGCCTCT 213963 ||||||||||| || || |||| Sbjct 1377724 CATGGCAAAGGCCCCTGGTCTCT 1377702 Score = 98.7 bits (108), Expect = 2e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586 ||||||||| ||||| || |||||||| |||||| | |||||||||||| || || || Sbjct 1378313 TGTGTACTCTATGATTTCTGTGCACAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTG 1378254 Query 213587 GTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| | ||| |||| | ||||||||||||||||| || | || |||||| ||| Sbjct 1378253 GTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTGCCCGTCTCTGTCTG 1378194 Query 213647 GGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTG 213695 ||| | | || | |||||| | | ||| | ||||| |||||| Sbjct 1378193 CGACTCGATGATGGCGTGCCAGAGCTGCTGAGCCCTCACCACGCGCCTG 1378145 Score = 96.9 bits (106), Expect = 6e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 ||| || || |||||||||||||| | ||| | ||| ||||| | ||| ||| Sbjct 1381428 CTGAAACTCCCCTGAGAGCACCCTGCGAGTGTAGATGTTGCTTGTGTATGCCTCAATGGA 1381369 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||| ||||| ||||| ||||| |||||| ||||||||||| || |||| || || || Sbjct 1381368 CTCATTGTTACCCAGGATCTGGGCAGTGGAAGCTGTGGGCATTGGGGCCAAAAGCAGGCT 1381309 Query 213038 GTTCCTCACTCCGTGC 213053 ||||||||| |||||| Sbjct 1381308 GTTCCTCACGCCGTGC 1381293 >seq9988 Length=1776943 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 241414 CAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAG 241473 ||| |||| ||| ||||| |||||||| || |||| ||| ||| || || || || Sbjct 732528 CAGCACCTTCTGCTTGAGCTGGGCCACTTGCTCCCTCAGCACGCTGGCTGTGGAGGCAAG 732469 Query 241474 TCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAG 241533 | | ||| | | ||| || || || ||||||||||||| ||| | ||||| Sbjct 732468 CTCGGTGTTCTGCGTCTTCAGGGTTTTGACCTTCTCCTCCAGCCTAAAGATCCTCTCCAG 732409 Query 241534 TTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTT 241593 || | | ||| || || | ||| || | | |||||| || | || || |||||||| Sbjct 732408 CTTCCTCTTGCGACACTTTGAGGCGGCTATCCTGTTCCGCAGCTTTTTCCGCTCCGCCTT 732349 Query 241594 GATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||||| ||||||| ||||||||||| || ||| Sbjct 732348 GATGCGCTCCTGGTTGTCCATGTCGATGGGGGAC 732315 >seq9854 Length=3514852 Score = 98.7 bits (108), Expect = 2e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 241498 CTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGC 241557 |||||| ||||||||||||||| ||| | |||||||| | ||||| |||| || Sbjct 2816123 CTTCACCCTCTCCTCCAGCCGCGAGATCCTCTCCAGTTTTCTTTTCCGGCACTTGGACGC 2816182 Query 241558 TGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTC 241617 |||| | ||||| | | ||| | |||||||||||||| ||||||| ||||||||| Sbjct 2816183 GGCCACCCTGTTCCTCATGCGCTTCCTCTCCGCCTTGATGCGCTCCTGGTTCTCCATGTC 2816242 Query 241618 GATCGGAGA 241626 |||||| || Sbjct 2816243 GATCGGGGA 2816251 >seq51 Length=752366 Score = 84.2 bits (92), Expect = 4e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || |||| ||| ||||| | |||||| || || || ||||||| || |||| || Sbjct 77557 TCATCCCTGCTAATGAGTTCATTGGAGTAGGTAAGGCCCGGCATGAGGCCTCTCTTCTTC 77616 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||| | || || || || ||||||||||||||||| |||||||| || || || || Sbjct 77617 AGCCAGTAGATGGCAGCAAATGAGCCAGAGAAGAAGATCCCCTCCACAGCTGCAAAAGC 77675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931414262451200