Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10006 87.8 5e-12 >seq10006 Length=1510013 Score = 87.8 bits (96), Expect = 5e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || ||||| | || || ||||| || |||||||| | ||| Sbjct 835975 GTCTTGACGGCCGTGTCGATCAGACCCTCTCGGCCTCCCATGGCGTGGAAGAAGAACTCG 836034 Query 302680 TCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 || ||| ||||| | | ||||| |||| ||||| || | |||||| | Sbjct 836035 GTGGG-CGTCAGCCCGGCCAGGTAGGAGTTCTCCACGAAGCCTCTGCTCTCGGGACCGTA 836093 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| |||| | ||||| ||||| || | || || ||||| | ||||| |||||||| Sbjct 836094 GTCGTCCTTGATGAAGTGAGGCAGCGTGCGGTGCTTGAAGCCGAAGGGGATTCGCTTTCC 836153 Query 302799 ATCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 836154 CTCCACGTTCTGCTGGCCCA 836173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471625628990660