Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq483 91.5 1e-13 >seq483 Length=217099 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 107545 AGAGGTTTAAAA--TGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA 107602 ||||||| ||| |||| || |||||||| || | || ||||| ||||| ||| | || Sbjct 215801 AGAGGTTGCAAACATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTAGA 215742 Query 107603 AACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGT 107662 |||| || |||| || ||| | || ||| ||||| || || || ||| | Sbjct 215741 GGTGGAGCCTAGCGACACCATCGAGAATGTGAAAGCCAAGATCCAGGACAAGGAGGGCAT 215682 Query 107663 GCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAAT 107722 ||| || |||||||| || || | ||| || || |||||||| || | | || | Sbjct 215681 CCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCT 215622 Query 107723 GGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 | | ||||||||||| || |||||||| || | ||| |||| Sbjct 215621 GTCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGT 215580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398827311854020