Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq10150 102 8e-17 >seq10150 Length=863575 Score = 102 bits (112), Expect = 8e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 20588 CTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGCCAACGCCTGCTAAAACAGGCCAAA 20647 || ||||| ||||||||||||||| || |||| ||| |||| || | | |||||| Sbjct 312877 CTCAGTGTGAAGTTTGGGGCTCCTCTTAAAGCTTGCCGCGGCCTCCTGGAGCGGGCCAAG 312818 Query 20648 AAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCACGTGGGCAGTGGCTGCAAAGATGCA 20707 || | || ||||| ||| |||| ||||||||||| || ||||| ||||||| || ||| Sbjct 312817 GAACTGGGGCTAGATGTGGTCGGCGTCAGCTTCCATGTTGGCAGCGGCTGCACTGACGCA 312758 Query 20708 CAGGCTTACAGAAAAGCCATAGCTGAGGC 20736 || | |||| ||||| || || || || Sbjct 312757 GAGACCTACACCAAAGCTATTGCAGACGC 312729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463486613822400