Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq10130 208 1e-47 seq10061 185 1e-40 seq81 179 5e-39 seq6817 176 6e-38 seq169 176 6e-38 seq309 165 1e-34 seq264 152 7e-31 seq1237 149 9e-30 seq10071 127 3e-23 seq80 120 4e-21 seq3283 111 2e-18 seq348 109 8e-18 seq140 105 1e-16 >seq10130 Length=961328 Score = 208 bits (230), Expect = 1e-47 Identities = 220/290 (76%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 259896 TGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCC 259955 ||||| || ||| |||||| || |||| |||||||| || |||||||| || | Sbjct 294974 TGTCGGAGAAGTGGTTCACGCACGCCTCGCCGACGCTCTTCAACGCCGGCACCAACCGGC 295033 Query 259956 CGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATG 260015 ||||| || ||||| ||| ||| |||||||| ||| |||||||||||||| | Sbjct 295034 CGCAGCTGTCCAGCTGCTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACG 295093 Query 260016 ACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCAC 260075 ||||||||||||||||||| |||||||||||| |||||||||||||||| | || | Sbjct 295094 ACACGCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGCGGCATCGGCGTGGCGGTGA 295153 Query 260076 ACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTG 260135 | | ||| | ||||| |||| | || |||||||||||| | ||||||||||| | Sbjct 295154 GCTGCATCCGCTCGACGGGCAGCTACATCGCCGGCACCAACGGCAACTCCAACGGCCTGG 295213 Query 260136 TGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 |||| ||||| || || | ||| |||| || |||||||| |||||| || Sbjct 295214 TGCCGATGCTGCGGGTCTACAACAACACCGCCCGCTACGTGGACCAGGGC 295263 Score = 152 bits (168), Expect = 7e-31 Identities = 300/447 (67%), Gaps = 8/447 (2%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| |||| | |||||||| ||| |||||||| ||||||||| |||| | Sbjct 295261 GGCGGCAACAAGAGGCCCGGCGCCTTCGCCATGTACCTGGAGCCGTGGCACTTCGACGTG 295320 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||| ||||| || || |||||| ||||||| |||| | ||||| | | Sbjct 295321 TTCGACTTCCTGGAGCTGAAGAAGAACACGGGCAAGGA----GGAGCAGCGGGCCAGGG- 295375 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 | ||||| ||||||||||||| ||||||||| ||| | || ||| || | || Sbjct 295376 -ACCTCTTCTACGGCCTGTGGATCCCCGACCTGTTCATGAGGCGGGTGGAGAGCAACCAG 295434 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||||| || | || || |||| ||||||||| |||| |||| || | || Sbjct 295435 GACTGGTCCCTGATGTGTCCCAGCGAGTGTCCCGGCCTGGACGAGTGCTGGGGGGAGGAG 295494 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCGTGCCCGCA 262087 || || | ||||| | || || ||| || Sbjct 295495 TTCGAGACGCTCTACACAAAGTACGAGGCGGAGGGGCGGGTGAAGAAGGTGGTGAAGGCC 295554 Query 262088 CGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTC 262147 | ||| | |||| ||||| ||| | | || | ||||||||||||||||||||| || Sbjct 295555 CAGCAGCTGTGGTACGCCATCATCGAGTCGCAGACGGAGACCGGCACGCCCTACATGCTC 295614 Query 262148 TACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GC 262206 |||||||||||| ||||| | ||||||||||||||||||||||||| | || | Sbjct 295615 TACAAGGACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCA-AGTGCAG 295673 Query 262207 CAACCTGTGCACCGAGATCGTCCAGTT 262233 |||||| ||||||||| | || |||| Sbjct 295674 CAACCTCTGCACCGAGGTGGTGGAGTT 295700 Score = 118 bits (130), Expect = 2e-20 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 262934 TGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGT 262993 |||| |||| | ||||||||| ||| | || | |||||||||||||||| |||| | Sbjct 296186 TGCTGCTGGCCCCCATGCCCACCGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCA 296245 Query 262994 TCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGG 263053 |||||| | ||| |||||||||||||| ||||| || ||||| ||||| || | | Sbjct 296246 TCGAGGCCTACACCAGCAACATCTACACCCGCCGGGTCCTCTCCGGCGAGTTCCAGATCG 296305 Query 263054 TCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGA 263098 |||||| ||||| ||||| | || || |||||| ||||||| Sbjct 296306 TCAACCCTCACCTCCTCAAGGACCTGACGGAGCGCGGGCTGTGGA 296350 >seq10061 Length=1224714 Score = 185 bits (204), Expect = 1e-40 Identities = 179/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| ||| |||| ||||| Sbjct 343536 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCCTCCAAGGCCATG 343483 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| || | ||||||| | ||||||| |||| Sbjct 343482 AGCATCATGAACTCCTTGGTCAACGACATCTTCCAGCGCATCGCCTCCGAGGCGTCTCGC 343423 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 343422 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 343363 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| || |||||||||| Sbjct 343362 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 343314 >seq81 Length=692260 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 104800 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 104747 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 104746 AGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCTCCGAGGCTTCCCGC 104687 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | | |||||||||||||| |||||| Sbjct 104686 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGC 104627 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| || |||||||||| Sbjct 104626 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 104578 >seq6817 Length=7793 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| ||| |||| ||||| Sbjct 551 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCCTCCAAGGCCATG 604 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| | || ||||||| ||||||| ||| Sbjct 605 AGCATCATGAACTCCTTCGTCAACGACATCTTTGAGCGCATCGCGTCCGAGGCTTCCCGC 664 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 665 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 724 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| || |||||||||| Sbjct 725 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 773 Score = 149 bits (164), Expect = 9e-30 Identities = 144/185 (78%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 |||| |||| ||||| ||||||||||| || ||||||||||| | || ||||||| Sbjct 7782 CTCCTCCAAGGCCATGAGCATCATGAACTCCTTCGTCAACGACATCTTTGAGCGCATCGC 7723 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 ||||||| |||||||| | || |||||||||| ||| ||| | | | ||||| Sbjct 7722 GTCCGAGGCTTCCCGCCTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGAT 7663 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 |||||||||||||||||| | ||| ||| || ||||||| ||||||||| || ||||| Sbjct 7662 CCAGACCGCCGTGCGCCTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGG 7603 Query 725138 CACCA 725142 ||||| Sbjct 7602 CACCA 7598 >seq169 Length=494752 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 18847 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 18794 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| || |||| ||||||| ||| Sbjct 18793 AGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGAATCGCGTCCGAGGCTTCCCGC 18734 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 18733 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 18674 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| || |||||||||| Sbjct 18673 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 18625 Score = 158 bits (174), Expect = 2e-32 Identities = 146/185 (79%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 |||| |||| ||||| |||||||||||||| ||||||||||| |||| ||||||| Sbjct 490034 CTCCTCCAAGGCCATGAGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGC 490093 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 ||||||| |||||||| | || |||||||||| ||| ||| | | | ||||| Sbjct 490094 GTCCGAGGCTTCCCGCCTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGAT 490153 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 |||||||||||||||||| | ||| ||| || ||||||| ||||||||| || ||||| Sbjct 490154 CCAGACCGCCGTGCGCCTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGG 490213 Query 725138 CACCA 725142 ||||| Sbjct 490214 CACCA 490218 >seq309 Length=361333 Score = 165 bits (182), Expect = 1e-34 Identities = 144/179 (80%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023 |||| ||||| |||||||||||||| ||||||||||| |||| ||||||| | |||| Sbjct 356164 CAAGGCCATGAGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCTCCGA 356223 Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083 ||| |||||||| | || |||||||||| ||| ||| | | | ||||||||||| Sbjct 356224 GGCTTCCCGCCTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGAC 356283 Query 725084 CGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 356284 CGCCGTGCGCCTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 356342 Score = 100 bits (110), Expect = 4e-15 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 725020 CCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCC 725079 ||||||| |||||||| | || |||||||||| ||| ||| | | | ||||||| Sbjct 331103 CCGAGGCTTCCCGCCTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCC 331162 Query 725080 AGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCA 725139 |||||||||||||||| | ||| ||| || ||||||| ||||||||| || ||||| | Sbjct 331163 AGACCGCCGTGCGCCTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGAA 331222 Query 725140 CCA 725142 ||| Sbjct 331223 CCA 331225 >seq264 Length=459795 Score = 152 bits (168), Expect = 7e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023 |||| ||||| |||||||||||||| ||||||||||| | || ||||||| | |||| Sbjct 53985 CAAGGCCATGAGCATCATGAACTCGTTCGTCAACGACATCTTTGAGCGCATCGCCTCCGA 54044 Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083 ||| || ||||| | || |||||||||| ||| ||| | | | ||||||||||| Sbjct 54045 GGCGTCCCGTCTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGAC 54104 Query 725084 CGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||||||| | ||| ||| || ||||||| ||||||||| || |||||||||| Sbjct 54105 CGCCGTGCGCCTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 54163 >seq1237 Length=49935 Score = 149 bits (164), Expect = 9e-30 Identities = 144/185 (78%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 |||| |||| ||||| |||||||||||||| || |||||||| | || ||||||| Sbjct 31093 CTCCTCCAAGGCCATGAGCATCATGAACTCGTTCGTTAACGACATCTTTGAGCGCATCGC 31034 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 ||||||| |||||||| | || |||||||||| ||| ||| | | | ||||| Sbjct 31033 GTCCGAGGCTTCCCGCCTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGAT 30974 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 ||||||||| |||||||| | ||| |||||| ||||||| ||||||||| || ||||| Sbjct 30973 CCAGACCGCTGTGCGCCTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCTGAGGG 30914 Query 725138 CACCA 725142 ||||| Sbjct 30913 CACCA 30909 >seq10071 Length=1187276 Score = 127 bits (140), Expect = 3e-23 Identities = 117/148 (79%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 724995 AACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGC 725054 |||||||| |||| ||||||| ||||||| |||||||| | || |||||||||| Sbjct 9725 AACGACATCTTCGAGCGCATCGCGTCCGAGGCTTCCCGCCTGGCTCACTACAACAAGCGC 9666 Query 725055 AACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTG 725114 ||| ||| | | | ||||||||||||||||||||||| | ||| |||||| ||| Sbjct 9665 TCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGCCTCCTGCTGCCCGGCGAGCTG 9606 Query 725115 GCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||| ||||||||| || |||||||||| Sbjct 9605 GCCAAGCACGCCGTGTCTGAGGGCACCA 9578 Score = 93.3 bits (102), Expect = 6e-13 Identities = 95/123 (77%), Gaps = 6/123 (5%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 12925 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 12872 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||||| |||| Sbjct 12871 AGCATCATGAACTCCTTGGTCAACGACATCTTCGAGCGCATCGCCTCCGAGGCGTCTCGC 12812 Query 725034 CTG 725036 ||| Sbjct 12811 CTG 12809 >seq80 Length=3955291 Score = 120 bits (132), Expect = 4e-21 Identities = 131/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028 ||||| ||||||||||| || || |||||| || |||| || |||| |||||| || Sbjct 3306821 CCATGAGCATCATGAACTCCTTCGTGAACGACCTGTTCGAGCGGATCGCCACCGAAGCGT 3306762 Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 |||||||| | | |||||||||| ||| ||| || | ||| | |||||||||| Sbjct 3306761 CCCGCCTGGCTCAGTACAACAAGCGCTCCACCATCACCAGCAGAGAGGTGCAGACCGCCG 3306702 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| | ||| ||| || ||||||| ||||||||| || |||||||||| Sbjct 3306701 TCAGGCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 3306648 >seq3283 Length=9568 Score = 111 bits (122), Expect = 2e-18 Identities = 129/173 (75%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| ||| |||| ||||| Sbjct 6531 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCCTCCAAGGCCATG 6584 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| | || ||||||| ||||||| ||| Sbjct 6585 AGCATCATGAACTCCTTCGTCAACGACATCTTTGAGCGCATCGCGTCCGAGGCTTCCCGC 6644 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGC 725086 ||||| | || || |||||| | ||| ||| | | | ||||||||| |||| Sbjct 6645 CTGGCTCACTACAGCAAGCGAACCACCATCACCTCCAGGGAGATCCAGTCCGC 6697 >seq348 Length=361584 Score = 109 bits (120), Expect = 8e-18 Identities = 94/115 (82%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 |||||| ||||||| || |||||| | ||||| ||| | |||||||||| ||||| Sbjct 90712 CGAGCCTCTGCTGCAGGAGAACCCGCAACGCTTCGTCATCTTCCCCATCCAGTACCACGA 90771 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | |||||| || ||||||||||||||||| ||||||||||||||||| Sbjct 90772 CATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGT 90825 Score = 102 bits (112), Expect = 1e-15 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| ||| | ||||| || |||| ||||| | | || |||||||||||||||||| Sbjct 110624 CGCTTCATGCAGGAGGTGCAGGTGCCGGAGGCCAGGTGTTTCTACGGGTTCCAGATCGCC 110565 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || |||||||||||||| | ||| || ||||||||||||||| ||| ||| || Sbjct 110564 ATGGAGAACATCCACTCTGAGATGTACAGCCTGCTGATCGACACCTACATCAGGGAGCC 110506 Score = 87.8 bits (96), Expect = 3e-11 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 1456179 GAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCC 1456237 ||||| | || | ||| ||||| || ||||||||||| ||||| ||| ||| |||| Sbjct 109572 GAGCGTGTGGTGGCCTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGCTCGTTCGCCGCC 109513 Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTAT 1456297 ||||| ||||| |||||| | ||||| |||||||| | | ||| |||||||| | || Sbjct 109512 ATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGG-CCTGACCTTCAGCAACGAGCTCAT 109454 Query 1456298 CAGTCGCGACGAAGT 1456312 ||| | ||||| || Sbjct 109453 CAGCAGAGACGAGGT 109439 >seq140 Length=644896 Score = 105 bits (116), Expect = 1e-16 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 725007 GACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGC 725066 || ||||||| | ||||||| || ||||| | || |||||||||| ||| ||| | Sbjct 309900 GAGCGCATCGCCTCCGAGGCGTCCCGTCTGGCTCACTACAACAAGCGCTCCACCATCACC 309841 Query 725067 ACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCC 725126 | | |||||||||||||| |||||||| | ||| ||| || ||||||| ||||||| Sbjct 309840 TCCAGGGAGATCCAGACCGCTGTGCGCCTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCC 309781 Query 725127 GTCTCCGAGGGCACCA 725142 || || |||||||||| Sbjct 309780 GTGTCTGAGGGCACCA 309765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176829320289160