Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq348 86.0 5e-12 >seq348 Length=361584 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 ||||||||||| || || ||||| || || | |||||||| | |||||||| || Sbjct 109442 TCGTCTCTGCTGATGAGCTCGTTGCTGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 109501 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || || ||||| || || || || ||||| ||||| || |||||||| || || Sbjct 109502 AGCCAGAAGATGGCGGCGAACGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAAGGCC 109561 Query 4692 AC 4693 || Sbjct 109562 AC 109563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426996616489940