Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AC_000001.1 Length=33034 Score E Sequences producing significant alignments: (Bits) Value seq213072 107 4e-19 >seq213072 Length=511 Score = 107 bits (118), Expect = 4e-19 Identities = 219/320 (68%), Gaps = 4/320 (1%) Strand=Plus/Plus Query 5321 TTCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCT 5380 ||| || |||| ||||||||||| | || || || |||||||| | | || Sbjct 173 TTCTGCGCTAAGATTGTCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGC 232 Query 5381 GGCGATGGTTTTTGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAAtttttttGTTGTC 5440 || |||| ||| | | || || | ||||| ||||| |||| ||||||| ||| Sbjct 233 GGTGATGCCTTTGAGGGTGGCCGCATCCATCTGGTCAGAAAAG-CAATCTTTTTGT-GTC 290 Query 5441 CAATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCAT 5500 | || |||||||| || || | ||||||||| || | ||| || ||| |||| Sbjct 291 AAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAG 350 Query 5501 GGTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTC 5560 ||||||||| ||| | || || || ||||| |||||||||||||||||||||| Sbjct 351 GGTTTGGTT-TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTC 409 Query 5561 TTTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCAC 5620 || |||||| ||| || ||||||| ||| || | ||||| || | | | |||| Sbjct 410 GCGCGCAACGCACCGCCATTC-GGGAAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCAC 468 Query 5621 TGCCCATCCTCTGTTGTGCA 5640 ||| || | |||||||| Sbjct 469 GCGCCAACCGCGGTTGTGCA 488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105051271510904