Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AC_000020.1 Length=31323 Score E Sequences producing significant alignments: (Bits) Value seq213072 102 2e-17 >seq213072 Length=511 Score = 102 bits (112), Expect = 2e-17 Identities = 154/215 (72%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 5687 TTTTTGTTGTCTAGCTTGGTAGCAAAAGACCCATAGAGGGCATTTGACAGCAGCTTAGCA 5746 ||||||| ||| |||||||| ||||| ||||| |||||||| || ||||||| ||| || Sbjct 281 TTTTTGT-GTCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCG 339 Query 5747 ATGCTGCGCATGGTTTGATTTTTGCTTTTGTCTGCTTCTTCTTTGGCACTGATGTTGAGC 5806 ||| ||||| |||||| ||||||| || || || ||||| |||||| ||| Sbjct 340 ATGGAGCGCAGGGTTTGGTTTTTGCGCGA-TCGGCGCGCTCCTTGGCCGCGATGTTTAGC 398 Query 5807 TGCACATACTCTCTGGCGAGACATTTCCACTCTGGAAACACGGTGGTTCTGGTATCAGGG 5866 ||||| || || | || | || ||| || |||| |||||||| | || || Sbjct 399 TGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAG-ACGGTGGTGCGCTCGTCGGGC 457 Query 5867 ATGAGGGTAACCTTCCACCCGCGGTTGTGCAGGGT 5901 | ||| || ||| ||||||||||||||||| Sbjct 458 ACCAGGTGCACGCGCCAACCGCGGTTGTGCAGGGT 492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99603861959590