Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AC_000190.1 Length=33501 Score E Sequences producing significant alignments: (Bits) Value seq213072 118 2e-22 >seq213072 Length=511 Score = 118 bits (130), Expect = 2e-22 Identities = 214/308 (69%), Gaps = 4/308 (1%) Strand=Plus/Plus Query 5009 TCCGTTTCGATAAAAGAAGAAGATTTGACAGAAAATTCTCCGTTGGCAATGCCCTTGGCG 5068 || ||||| | ||| || || ||||||| | | | || || ||||| ||| | Sbjct 189 TCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGCGGTGATGCCTTTGAGG 248 Query 5069 GTGGAAGAATCAAGTTGATCGGCGAAAACGGtttttttGTTGTCTAGTTTGGTGGCAAAC 5128 |||| | ||| | || || | ||| | | ||||||| ||| || |||||||||||| Sbjct 249 GTGGCCGCATCCATCTGGTCAGA-AAAGCAATCTTTTTGT-GTCAAGCTTGGTGGCAAAC 306 Query 5129 GAGCCGTACAGAGCGTTGGACAAGAGTTTAGCGATGCTGCGGATGGTTTGAtttttttCC 5188 || ||||| || |||||||||| | || |||||| ||| | |||||| ||||| | Sbjct 307 GACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTG-GTTTTTGCG 365 Query 5189 TTGTCTGCCTTTTCCTTGGCCGCAATGTTTAGTTTGACATACTCTTGAGCGATGCATTTC 5248 || || ||||||||||| |||||||| | || || || | || | ||| | Sbjct 366 CGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGC 425 Query 5249 CATTCGGGAAAAACGGTGGTGCGCTCATCTGTTACAATGCGTACTTTCCAGCCTCTGTTG 5308 |||||||| || |||||||||||||| || | || | | | || ||| || | |||| Sbjct 426 CATTCGGG-AAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCACGCGCCAACCGCGGTTG 484 Query 5309 TGCAGTGT 5316 ||||| || Sbjct 485 TGCAGGGT 492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106538086391362