Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq92481 98.7 1e-15 seq3661 98.7 1e-15 >seq92481 Length=981 Score = 98.7 bits (108), Expect = 1e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||| ||||| ||||||||||| || ||||| |||||||||||||| ||||| Sbjct 197 ATGTAGGTATCTATGAGCAGGCTGTACATCTCAGAGTGGATGTTCTCCATGGCGATCTGG 256 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || ||||| ||||| ||||| || | | ||||||||| Sbjct 257 AAACCGTAGAAGCAGCGGGCCTCGGTCACCTGAACTTCC 295 >seq3661 Length=2364936 Score = 98.7 bits (108), Expect = 1e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||| ||||| ||||||||||| || ||||| |||||||||||||| ||||| Sbjct 461022 ATGTAGGTATCTATGAGCAGGCTGTACATCTCAGAGTGGATGTTCTCCATGGCGATCTGG 461081 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || ||||| ||||| ||||| || | | ||||||||| Sbjct 461082 AAACCGTAGAAGCAGCGGGCCTCGGTCACCTGAACTTCC 461120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514780437960360