Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5983 203 4e-47 seq198807 197 2e-45 >seq5983 Length=3405033 Score = 203 bits (224), Expect = 4e-47 Identities = 151/177 (85%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || |||||| |||| |||||||| |||||||||||| |||| ||||||||| |||||||| Sbjct 1577680 CTTGAGGCCGGTGACGTGGGCGATCATGTAGGTCAGGAGGGCGTAGCTGGCGATGTTGAA 1577621 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||| ||||| ||||||||||| |||||||| |||||||||||||| ||||| ||| | Sbjct 1577620 GGGCACGCCCAGGCCCATGTCCCCGGAGCGCTGATACAGCTGGCAGGACAGCTCGCCGTC 1577561 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||||||||||||||||| |||||| || |||||||||||| | ||| ||| Sbjct 1577560 GCTTACGTAGAACTGGCACAGGGCGTGGCACGGAGGCAGGGCCATGTTGTGCAAGTC 1577504 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104 |||| || ||||||||||||||||| ||||| ||||| |||||||| || ||||| | Sbjct 1576438 CGGCTCCAAAGTGCCTCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCCTCCCGCT 1576379 Query 146105 GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164 | | ||| | ||||| |||||||| |||||||||||||||||||| |||| Sbjct 1576378 CCTTGAAGCCGTTTTTATCCAGGAACTCCCGGGAACCGTTGGCGTCCCAGATCTTCACGC 1576319 Query 146165 CCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 || || | || ||||| ||||| | |||||| ||| Sbjct 1576318 CCTTCTCAGACAGCTCCTTGGAATTCGTGGAACCC 1576284 >seq198807 Length=933 Score = 197 bits (218), Expect = 2e-45 Identities = 150/177 (85%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || |||||| |||| |||||| | |||||||||||| |||| ||||||||| |||||||| Sbjct 679 CTTGAGGCCGGTGACGTGGGCAATCATGTAGGTCAGGAGGGCGTAGCTGGCGATGTTGAA 738 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||| ||||| ||||||||||| |||||||| |||||||||||||| ||||| ||| | Sbjct 739 GGGCACGCCCAGGCCCATGTCCCCGGAGCGCTGATACAGCTGGCAGGACAGCTCGCCGTC 798 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||||||||||||||||| |||||| || |||||||||||| | ||| ||| Sbjct 799 GCTTACGTAGAACTGGCACAGGGCGTGGCACGGAGGCAGGGCCATGTTGTGCAAGTC 855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586924115545080