Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_001734.1 Length=30536 Score E Sequences producing significant alignments: (Bits) Value seq213072 93.3 8e-15 >seq213072 Length=511 Score = 93.3 bits (102), Expect = 8e-15 Identities = 152/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 5599 TTTTTGTTATCTAGCTTGGTAGCAAATGAGCCATACAGGGCATTTGACAGTAGCTTGGCG 5658 ||||||| || |||||||| ||||| || || || ||||| || ||||| | ||||||| Sbjct 281 TTTTTGTG-TCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCG 339 Query 5659 ATGCTTCGCATGGTTTGATTTTTGCTTTTGTCTGCTTTTTCTTTGGCGTTAATGTTGAGC 5718 ||| |||| |||||| ||||||| || || || ||||| ||||| ||| Sbjct 340 ATGGAGCGCAGGGTTTGGTTTTTGCGCGA-TCGGCGCGCTCCTTGGCCGCGATGTTTAGC 398 Query 5719 TGCACATACTCTCTGGCAAGACATTTCCATTCTGGAAACACAGTGGTTCTCGTGTCCGGG 5778 ||||| || || | |||| || |||||| |||| || ||||| | | ||| || Sbjct 399 TGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAG-ACGGTGGTGCGCTCGTCGGGC 457 Query 5779 ATAAGGGTAACCTTCCATCCGCGGTTGTGTAGGGT 5813 | ||| || ||| ||||||||||| ||||| Sbjct 458 ACCAGGTGCACGCGCCAACCGCGGTTGTGCAGGGT 492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97098244591452