Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_002166.1 Length=40751 Score E Sequences producing significant alignments: (Bits) Value seq300558 668 0.0 seq266300 111 4e-20 >seq300558 Length=1001 Score = 668 bits (740), Expect = 0.0 Identities = 391/405 (97%), Gaps = 0/405 (0%) Strand=Plus/Minus Query 21637 TCAATGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCGGCCTAATCCAAAC 21696 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 432 TCGATGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCTGCCTAATCCAAAC 373 Query 21697 TCTTTACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGGTTA 21756 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 TCTTTACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGGTTA 313 Query 21757 GGGGGTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAG 21816 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 312 GGGGGTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAG 253 Query 21817 GCTACCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTC 21876 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 GCCACCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTC 193 Query 21877 TCTTCCATCCTTAACCGGAGGAGGGAATATCCTGCATTCGCGCACCCATCGACGAACTGT 21936 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct 192 TCTTCCATCCTTAACCGGAGGTGGGAATATCCTGCATTCCCGAACCCATCGACGAACTGT 133 Query 21937 TTCAAGGCTTCTTGGGCGTCGCTGGCGAGCGTTCCACTCCTGAAGTGTTAAGTACATCGC 21996 ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 132 TTCAAGGCTTCTTGGACGTCGCTGGCGTGCGTTCCACTCCTGAAGTGTCAAGTACATCGC 73 Query 21997 AAAGTCTCCGCAATTACACGCAAGAAAAAGCCGCATTGATGCGGC 22041 ||||||||||||||||||||||||||||| |||| | | ||||| Sbjct 72 AAAGTCTCCGCAATTACACGCAAGAAAAAACCGCCATCAGGCGGC 28 Score = 86.0 bits (94), Expect = 2e-12 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 22453 CAATAAAAAACCGCCATCAGGCGGTTTGGTGTTCTTTCAGTTCTTCAATTCG 22504 ||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 52 CAAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCG 1 >seq266300 Length=503 Score = 111 bits (122), Expect = 4e-20 Identities = 64/66 (97%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 22503 CGAATATTGGTTACGTCTGCATGTGCTATCTGCGCCCATATCATCCAGTGGTTATAGCAG 22562 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 503 CGAATATTGGTTACGTCTGCATGTGCTATCTGCGCCCATATCATCCAGTGGTCGTAGCAG 444 Query 22563 TCGTTG 22568 |||||| Sbjct 443 TCGTTG 438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129620330252862