Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq300558 654 0.0 seq266300 288 3e-73 >seq300558 Length=1001 Score = 654 bits (724), Expect = 0.0 Identities = 388/405 (96%), Gaps = 0/405 (0%) Strand=Plus/Minus Query 22228 TCAATGTTGGCCTGTATAGCTTCAGTGATTGCTATCCTCCTGTCTCGGCCTAATCCGAAC 22287 || ||||||||||||||||||||||||||||| || | |||||||| ||||||||| ||| Sbjct 432 TCGATGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCTGCCTAATCCAAAC 373 Query 22288 TCTTTACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGGTTA 22347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 TCTTTACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGGTTA 313 Query 22348 GGGGGTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAG 22407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 312 GGGGGTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAG 253 Query 22408 GCTACCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTC 22467 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 GCCACCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTC 193 Query 22468 TCTTCCATCCTTAACCGGAGGAGGGAATATCCTGCATTCGCGCACCCATCGACGAACTGT 22527 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct 192 TCTTCCATCCTTAACCGGAGGTGGGAATATCCTGCATTCCCGAACCCATCGACGAACTGT 133 Query 22528 TTCAAGGCTTCTTGGGCGTCGCTGGCGAGCGTTCCACTCCTGAAGTGTCAAGTACATCGC 22587 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 132 TTCAAGGCTTCTTGGACGTCGCTGGCGTGCGTTCCACTCCTGAAGTGTCAAGTACATCGC 73 Query 22588 AAAGTCTCCGCAATTACACGCAAGAAAAAGCCGCATTGATGCGGC 22632 ||||||||||||||||||||||||||||| |||| | | ||||| Sbjct 72 AAAGTCTCCGCAATTACACGCAAGAAAAAACCGCCATCAGGCGGC 28 >seq266300 Length=503 Score = 288 bits (318), Expect = 3e-73 Identities = 162/164 (99%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 28243 CCAAACGTCTCTTCAGGCCACTGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCA 28302 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 169 CCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCA 110 Query 28303 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 28362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 109 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 50 Query 28363 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGC 28406 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 49 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGC 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126376081081156