Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4563 95.1 1e-14 seq5457 93.3 5e-14 seq406260 91.5 2e-13 seq396948 91.5 2e-13 seq292949 91.5 2e-13 seq150899 91.5 2e-13 seq2003 91.5 2e-13 seq403687 89.7 6e-13 seq25410 89.7 6e-13 seq424138 86.0 7e-12 seq416872 86.0 7e-12 seq342582 86.0 7e-12 seq339184 86.0 7e-12 seq336440 86.0 7e-12 seq141153 86.0 7e-12 seq126997 86.0 7e-12 seq379503 84.2 2e-11 seq423842 82.4 9e-11 seq2929 82.4 9e-11 >seq4563 Length=585268 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 583051 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 583110 Query 60122 ACTATACTACCGAGGATTGA 60141 ||||||||| |||||| ||| Sbjct 583111 ACTATACTAACGAGGAGTGA 583130 Score = 93.3 bits (102), Expect = 5e-14 Identities = 72/85 (85%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 60058 AAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| | |||| || | |||||| |||||| ||||||||||||||||||||| ||| Sbjct 582876 AAAATTGTAACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 582935 Query 60116 CTCACCACTATACTACCGAGGATTG 60140 || |||||||||||| |||||| || Sbjct 582936 CTGACCACTATACTAACGAGGAGTG 582960 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 581800 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 581859 Query 60126 TACTACCGAGGATTG 60140 ||||| |||||| || Sbjct 581860 TACTAACGAGGAGTG 581874 >seq5457 Length=527991 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 296378 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 296437 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 296438 TATACTAACGAGGA 296451 >seq406260 Length=118 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 76 TTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 17 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 16 CTATACTAACGAGGA 2 >seq396948 Length=300 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 117 TTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 176 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 177 CTATACTAACGAGGA 191 >seq292949 Length=304 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/84 (85%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 60057 AAAAATTTT---CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||||||| |||| || | |||||| |||||| ||||||||||||||||||||| | Sbjct 290 AAAAATTTGAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 231 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||| |||||| Sbjct 230 TACTGACCACTATACTAACGAGGA 207 >seq150899 Length=141 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 64 TTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 123 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 124 CTATACTAACGAGGA 138 >seq2003 Length=750281 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 716408 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 716349 Query 60126 TACTACCGAGGATTG 60140 ||||| |||||| || Sbjct 716348 TACTAACGAGGAGTG 716334 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 656890 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 656831 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 656830 TACTAACGAGGA 656819 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 658943 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 658884 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 658883 TACTAACGAGGA 658872 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 665145 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 665086 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 665085 TACTAACGAGGA 665074 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 704359 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 704300 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 704299 TACTAACGAGGA 704288 >seq403687 Length=302 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 25 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 84 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 85 TACTAACGAGGA 96 >seq25410 Length=1719 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 269 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 210 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 209 TACTAACGAGGA 198 >seq424138 Length=1252 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 88 TTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 147 Query 60123 CTATACTACCGAGGA 60137 | |||||| |||||| Sbjct 148 CCATACTAACGAGGA 162 >seq416872 Length=424 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || || | || | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 269 TTACTTCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 328 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 329 CTATACTAACGAGGA 343 >seq342582 Length=298 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 95 TTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 36 Query 60123 CTATACTACCGAGGA 60137 ||| |||| |||||| Sbjct 35 CTACACTAACGAGGA 21 >seq339184 Length=417 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| | | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 23 TTACTCCCAGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 82 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 83 CTATACTAACGAGGA 97 >seq336440 Length=490 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| |||||| ||||||||||||||||||||| |||| |||| Sbjct 249 TTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACAGACCA 308 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 309 CTATACTAACGAGGA 323 >seq141153 Length=417 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| | | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 272 TTGCTCCCAGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 331 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 332 CTATACTAACGAGGA 346 >seq126997 Length=216 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| ||| || ||||||||||||||||||||| ||||| |||| Sbjct 138 TTACTCCCCGTCGGGGAATTGAAGCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 197 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 198 CTATACTAACGAGGA 212 >seq379503 Length=493 Score = 84.2 bits (92), Expect = 2e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 226 CTCCCCGTCGGGGAAATGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 167 Query 60126 TACTACCGAGG 60136 ||||| ||||| Sbjct 166 TACTAACGAGG 156 >seq423842 Length=595 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| |||||| |||||||| |||||||||||| ||||| |||| Sbjct 368 TTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCA 309 Query 60123 CTATACTACCGAGGA 60137 |||||||| ||| || Sbjct 308 CTATACTAACGACGA 294 >seq2929 Length=9842 Score = 82.4 bits (90), Expect = 9e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| || ||| ||||||||||||||||||||| ||||| |||| Sbjct 983 TTACTCCCCGTCGGGGAATTGACCCC-GGTCTCCCGCGTGACAGGCGGGGATACTGACCA 925 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 924 CTATACTAACGAGGA 910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568762471483560