Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq742 113 3e-20 >seq742 Length=2242023 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| ||||||||||||||||| || | || |||| ||||||||| ||||| Sbjct 1678470 TTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 1678411 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || |||| |||||| || ||| | || |||||||| ||||| ||| | | Sbjct 1678410 GATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 1678351 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||| | | || || |||| |||||||| ||||||||||| || || || Sbjct 1678350 CTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 1678291 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 1678290 GAAGATCTGCAT 1678279 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| ||||||||||| ||||| || | || |||| ||||||||| ||||| Sbjct 1675250 TTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 1675191 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 || |||| |||||| || ||| | || |||||||| ||| || ||||| | || Sbjct 1675190 GATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATC-TTAGCTTTAACAT 1675132 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 |||| | || | | || || || | |||||||| ||||| || || ||||| | Sbjct 1675131 TTTCTATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTTTTGA 1675072 Query 34377 CAAAGATCTGCAT 34389 ||||||||||||| Sbjct 1675071 CAAAGATCTGCAT 1675059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321389031833120