Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq300558 154 4e-33 >seq300558 Length=1001 Score = 154 bits (170), Expect = 4e-33 Identities = 94/100 (94%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 5967 TCGATGGCCTCACGAAACATCTTTTCATCGCCAATAAAAGTGGCGATAGTGAATTTAGTC 6026 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 702 TCGACGGCTTCACGAAACATCTTTTCATCGCCAATAAAAGTGGCGATAGTGAATTTAGTC 643 Query 6027 TGGATAGCCATAAGTGTTTTATCCATTTTTGGGAACTCCT 6066 ||||||||||||||||||| ||||||| || || |||||| Sbjct 642 TGGATAGCCATAAGTGTTTGATCCATTCTTTGGGACTCCT 603 Score = 93.3 bits (102), Expect = 1e-14 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 1695 CAGGCAATAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCG 1750 || |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56 CACGCAAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121807388675466