Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq742 107 2e-18 >seq742 Length=2242023 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || ||||| |||||||||||| ||| ||| | || ||||| || || |||||||| Sbjct 1678469 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAG 1678410 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||| || || || || | || ||||||||| || || ||| || | Sbjct 1678409 ATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 1678350 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | | ||||||||||| ||| || |||||||| || || ||||| || Sbjct 1678349 TCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 1678290 Query 45326 AAGATTTGCATG 45337 ||||| |||||| Sbjct 1678289 AAGATCTGCATG 1678278 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || ||||| ||||||||||| ||| ||| | || ||||| || || |||||||| Sbjct 1675249 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAG 1675190 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||| || || || || | || ||||||||| || || ||||| Sbjct 1675189 ATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCTTTAACATTT 1675130 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||||||||| | ||| || |||||||| ||||| || || ||| Sbjct 1675129 TCTATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTTTTGACA 1675070 Query 45326 AAGATTTGCATG 45337 ||||| |||||| Sbjct 1675069 AAGATCTGCATG 1675058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393017147970967