Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq300154 91.5 3e-13 seq300152 91.5 3e-13 seq1508 86.0 1e-11 >seq300154 Length=373 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| || |||||||||||||| ||| | ||||| ||||| |||||| Sbjct 92 GTTGCTTTCGCTGCTGTGGAAGGAATCTTCTTCTCTGGCTCGTTCGCCTCCATCTTCTGG 151 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 | ||||| ||||| | |||| ||||| || | |||||||||| |||| Sbjct 152 CTGAAGAAGAGGGGGCTAATGCCCGGTCTGACTTTCTCCAATGAGCTCAT 201 >seq300152 Length=362 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| || |||||||||||||| ||| | ||||| ||||| |||||| Sbjct 92 GTTGCTTTCGCTGCTGTGGAAGGAATCTTCTTCTCTGGCTCGTTCGCCTCCATCTTCTGG 151 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 | ||||| ||||| | |||| ||||| || | |||||||||| |||| Sbjct 152 CTGAAGAAGAGGGGGCTAATGCCCGGTCTGACTTTCTCCAATGAGCTCAT 201 >seq1508 Length=1569309 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 ||| | |||||| || ||||| ||||||||||| || ||||| ||| | || || || Sbjct 108197 GGAGCGAATTGTCGCTTTTGCAGCAGTTGAAGGCATTTTCTTCTCGGGTTCCTTTGCTTC 108256 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 ||| |||||| | ||||| || || | ||||||| || || |||||||||| | || Sbjct 108257 CATCTTCTGGCTAAAGAAGAGAGGGCTGATGCCTGGCCTGGCCCACTCCAATGAGCTGAT 108316 Query 102028 TTCTAGGGACGA 102039 | ||| ||||| Sbjct 108317 TAGTAGAGACGA 108328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984164633832785