Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5983 147 2e-30 seq198807 141 8e-29 >seq5983 Length=3405033 Score = 147 bits (162), Expect = 2e-30 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||| |||||||| ||||||| || |||||||||||||||||||||||||| || || Sbjct 1577676 AGGCCGGTGACGTGGGCGATCATGTAGGTCAGGAGGGCGTAGCTGGCGATGTTGAAGGGC 1577617 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || ||||||||||| |||| | ||| |||||||||||||||||||| || Sbjct 1577616 ACGCCCAGGCCCATGTCCCCGGAGCGCTGATACAGCTGGCAGGACAGCTCGCCGTCGCTT 1577557 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 ||||| ||||| |||| |||| || ||||| || ||||| Sbjct 1577556 ACGTAGAACTGGCACAGGGCGTGGCACGGAGGCAGGGCCAT 1577516 >seq198807 Length=933 Score = 141 bits (156), Expect = 8e-29 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||| |||||||| || |||| || |||||||||||||||||||||||||| || || Sbjct 683 AGGCCGGTGACGTGGGCAATCATGTAGGTCAGGAGGGCGTAGCTGGCGATGTTGAAGGGC 742 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || ||||||||||| |||| | ||| |||||||||||||||||||| || Sbjct 743 ACGCCCAGGCCCATGTCCCCGGAGCGCTGATACAGCTGGCAGGACAGCTCGCCGTCGCTT 802 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 ||||| ||||| |||| |||| || ||||| || ||||| Sbjct 803 ACGTAGAACTGGCACAGGGCGTGGCACGGAGGCAGGGCCAT 843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425547600786960