Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq266300 255 2e-63 seq300558 176 2e-39 >seq266300 Length=503 Score = 255 bits (282), Expect = 2e-63 Identities = 155/164 (95%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 42793 CCAAACGTCTCTTCAGGCCATTGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCA 42852 |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct 169 CCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCA 110 Query 42853 TTGCATGGGATCATTGGATATTGCGGGTTTAGTGGTTGTAGAAACACCTGACCGCTATCC 42912 ||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||| Sbjct 109 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 50 Query 42913 CTGATCAGTTTCTTGAAGGTAAATTCATCACCACCAAGTCTGGC 42956 ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 49 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGC 6 >seq300558 Length=1001 Score = 176 bits (194), Expect = 2e-39 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 39611 CGTCGACGGCCTCACGAAACATCTTTTCATCGCCAATAAAAGTGGCGATAGTGAATTTAG 39670 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 704 CGTCGACGGCTTCACGAAACATCTTTTCATCGCCAATAAAAGTGGCGATAGTGAATTTAG 645 Query 39671 TCTGGATAGCCATAAGTGTTTGATCCATTTTTTGGGACTCCT 39712 ||||||||||||||||||||||||||||| |||||||||||| Sbjct 644 TCTGGATAGCCATAAGTGTTTGATCCATTCTTTGGGACTCCT 603 Score = 93.3 bits (102), Expect = 2e-14 Identities = 51/51 (100%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 33584 AAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCG 33634 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51 AAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199489762855449