Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_006144.1 Length=34246 Score E Sequences producing significant alignments: (Bits) Value seq272266 345 9e-91 seq213072 268 2e-67 seq256110 244 2e-60 seq295602 93.3 9e-15 >seq272266 Length=497 Score = 345 bits (382), Expect = 9e-91 Identities = 379/498 (76%), Gaps = 6/498 (1%) Strand=Plus/Plus Query 6300 ACCTCTCCGCGCAGGGGCTCGTTGGTCCAGCAGAGGCGACCGCCCTTGCGAGAGCAGAAG 6359 ||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||| Sbjct 4 ACCTCTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAAT 63 Query 6360 GGTGGCAGGGGGTCAAGCAGGCGCTCGTCCGGGGGGTCGGCGTCGATGGTAAAGATGGCG 6419 || || |||||||| ||| | ||||||||||||||| ||||| | |||||||| || Sbjct 64 GGCGGTAGGGGGTCTAGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCG 123 Query 6420 GGCAGGAGGTGTTTGTCAAAGTAGTCGATCTGATGCC-CGGGGCGACGC-AGGGCGGTTT 6477 ||||| ||| | ||| |||||||| |||| ||| | || | | || || | Sbjct 124 GGCAGCAGGCGCGCGTCGAAGTAGTCTATCT--TGCATCCTTGCAAGTCTAGCGCCTGCT 181 Query 6478 CCCAGTCCCGCACCGCCAAGGCGCGCTCGTAGGGACTGAGGGGGGCGCCCCAGGGCATGG 6537 ||| | || | || | ||||||||||| || |||| |||| ||||| ||||||| Sbjct 182 GCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGG 241 Query 6538 GATGCGTCAGGGCCGAGGCGTACATGCCGCAGATGTCGTAGACGTAAAGGGGCTCCTCCA 6597 | || || || || ||||||||||||||||| |||||||| |||| |||||||| | Sbjct 242 GGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACGT-GAGGGGCTCTCTGA 300 Query 6598 GGACGCCGAGGTAGGTTGGGTAGCAGCGCCCCCCGCGGATGCTGGCCCGTACGTAGTCGT 6657 | | || || || || |||||||| | || |||||||||||||| || ||||| |||| Sbjct 301 GTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGT 360 Query 6658 AGAGCTCGTGCGAGGGGGCCAGAAGGTGGCGGCTGAGGTGAGCGCGCTGGGGCTTTTCAT 6717 | || ||||||||||| || || |||| | | | ||||| || ||||| || Sbjct 361 ATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTG 420 Query 6718 CTCGGAAGAGGATCTGCCTGAAGATGGCGTGGGAGTTGGAGGAGATGGTGGGCCGCTGAA 6777 |||||||| ||||||||||||||||| || |||||||| || ||||| || ||||| | Sbjct 421 CTCGGAAG-CTATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTGGA 479 Query 6778 AAATGTTGAAGCGGGCGT 6795 | | |||||||| ||||| Sbjct 480 AGACGTTGAAGCTGGCGT 497 >seq213072 Length=511 Score = 268 bits (296), Expect = 2e-67 Identities = 266/339 (78%), Gaps = 4/339 (1%) Strand=Plus/Plus Query 5958 GCGCTGAGGTTGTCAGTTTCTATATATGAGGAAGATTTGATGGCGAGCGCCCCCGTGGAG 6017 ||||| || ||||||||||| | | | ||||| |||||||| | | |||| || | Sbjct 177 GCGCTAAGATTGTCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGCGGTG 236 Query 6018 ATGCCCTTGAGGTGCTCGGGGCCCATTTGGTCAGAAAACACAATCTGTCGGTTGTCAAGC 6077 ||||| |||||| | | |||| ||||||||||| |||||| | || ||||||| Sbjct 237 ATGCCTTTGAGGGTGGCCGCATCCATCTGGTCAGAAAAG-CAATCTTTTTGT-GTCAAGC 294 Query 6078 TTGGTTGCAAAAGACCCGTAGAGGGCGTTGGAGAGCAACTTGGCGATGGAGCGCTGGGTT 6137 ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 295 TTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTT 354 Query 6138 TGGtttttttCCCGGTCGGCTTTTTCCTTGGCTGCGATGTTGAGCTGGACGTACTCCCTG 6197 ||| ||||| | || ||||| |||||||| |||||||| ||||| ||||| || | Sbjct 355 TGG-TTTTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGC 413 Query 6198 GCCACGCACTTCCAGCCGGGAAAAACGGCCGTGCGCTCGTCCGGCACCAGCCTTACGCTC 6257 || |||||| ||| |||| || |||| ||||||||||| |||||||| |||| | Sbjct 414 GCAACGCACCGCCATTCGGG-AAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCACGCGC 472 Query 6258 CATCCGCGGTTGTGCAGGGTGATGACGTCGATGCTGGTG 6296 || ||||||||||||||||||| | ||| | ||||||| Sbjct 473 CAACCGCGGTTGTGCAGGGTGACAAGGTCAACGCTGGTG 511 >seq256110 Length=496 Score = 244 bits (270), Expect = 2e-60 Identities = 273/364 (75%), Gaps = 2/364 (1%) Strand=Plus/Minus Query 10588 TGGACGTGGAGGAGGGCCAGGGGTTGGCTCGGCTGGGGGCCTTGAGTCCCGAGGGGCACC 10647 ||||| ||||||||||| |||| |||| ||||| || || ||| ||| |||||| Sbjct 366 TGGACTTGGAGGAGGGCGAGGGCCTGGCGCGGCTAGGAGCGCCCTCTCCTGAGCGGCACC 307 Query 10648 CGCGCGTGGCTCTGAAGCGCGACGCGGCGGAGGCGTACGTGCCGCGGAGCAATCTGTTTC 10707 | | ||| |||||||| || || |||||||||||||||||| || ||||||| Sbjct 306 CAAGGGTGCAGCTGAAGCGTGATACGCGTGAGGCGTACGTGCCGCGGCAGAACCTGTTTC 247 Query 10708 GCGACCGCAGCGGCGAGGAGGCCGAGGAGATGCGAGACTTGCGTTTTCGGGCGGGGCGGG 10767 |||||||| || |||||| ||||||||||||| || || | || ||||| | Sbjct 246 GCGACCGCGAGGGAGAGGAGCCCGAGGAGATGCGGGATCGAAAGTTCCACGCAGGGCGCG 187 Query 10768 AGTTGCGTCACGGGCTGGACCGGCAAAGGGTTCTGAGAGAGGAGGACTTTGAGGCGGACG 10827 || |||| || || ||| | || | || | ||| | ||||||||||||||| | |||| Sbjct 186 AGCTGCGGCATGGCCTGAATCGCGAGCGGTTGCTGCGCGAGGAGGACTTTGAGCCCGACG 127 Query 10828 AGCGCACGGGGGTGAGTTCCGCGCGGGCTCACGTGGCGGCCGCCAACCTGGTGAGCGCGT 10887 ||| || ||| | ||| ||||||| || ||||||||||||||| ||||||| | ||| | Sbjct 126 CGCGAACCGGGATTAGTCCCGCGCGCGCACACGTGGCGGCCGCCGACCTGGTAACCGCAT 67 Query 10888 ACGAGCAAACGGTCAAGGAGGAGATGAACTTCCAGAAGAGCTTCAATCATCACGTGCGCA 10947 ||||||| ||||| || ||||||| |||||| || ||||| || | |||||||| | Sbjct 66 ACGAGCAGACGGTGAACCAGGAGATTAACTTC--AAAAAGCTTTAACAACCACGTGCGTA 9 Query 10948 CGCT 10951 |||| Sbjct 8 CGCT 5 >seq295602 Length=499 Score = 93.3 bits (102), Expect = 9e-15 Identities = 97/126 (77%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 14458 TACAGAAGCTGGTATCTGGCTTACAACTACGGCGACCCGGAAAAGGGGGTGCGGGCCTGG 14517 ||| | |||||||| || || ||||||||||||||||| | | || | || | ||| Sbjct 371 TACCGCAGCTGGTACCTTGCATACAACTACGGCGACCCTCAGACCGGAATCCGCTCATGG 430 Query 14518 ACTCTGCTCACCACCCCGGACGTGACGTGCGGGTCCGAGCAGGTCTACTGGTCCCTGCCA 14577 || ||||| ||| || ||||| || ||||| || ||||||||||||||||| ||||| Sbjct 431 ACCCTGCTTTGCACTCCTGACGTAACCTGCGGCTCGGAGCAGGTCTACTGGTCGTTGCCA 490 Query 14578 GACATG 14583 | |||| Sbjct 491 G-CATG 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108909985932992