Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq4690 158 2e-33 seq3090 131 2e-25 >seq4690 Length=434716 Score = 158 bits (174), Expect = 2e-33 Identities = 193/263 (73%), Gaps = 3/263 (1%) Strand=Plus/Plus Query 8678 CGGAACGCGGCCAACGGACAC---CCTTTGACGTTGCTACAGACTAGAGACTGGATAGTT 8734 ||||| | ||||| |||||| || |||||| | ||||| || ||| | | Sbjct 387634 CGGAAGGAGGCCAGAGGACACGGCCCGCGCACGTTGTTGCAGACCAGCCTCTGCAGGGAG 387693 Query 8735 GCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCC 8794 || || ||||||||| | || ||| | ||||||||||||||||| |||||||| || Sbjct 387694 GCGCTGTTGACGATCTCGAAGCCCGCAGTGCCGCCGAAGGTGCTGGGCTTCCAGTACTCC 387753 Query 8795 GGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGA 8854 || |||||||| |||| ||| |||||| ||||| || |||| ||||||| ||| | Sbjct 387754 GGAGAGCAGATTGGGTTCCCCAGGAGGCCCTTGAGAGAGTACGGGGCCCCCATCTCCACC 387813 Query 8855 ATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAAC 8914 ||| |||| ||||||||||||||||| | |||||| ||||| | | || | ||| | | Sbjct 387814 ATGGTCTCCCCGAAGATGGCGTTGGGCCTGGGCTTCTCCACGAGAAGGCCTGGGTAGAGC 387873 Query 8915 TCCACAGCCTCGATGTCTCCGTA 8937 ||||| || || | || ||| || Sbjct 387874 TCCACGGCGTCCACGTGTCCATA 387896 >seq3090 Length=57297 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 8741 TTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAG 8800 || ||||| | || ||| | | || ||||| ||||| || |||||||| |||| ||| Sbjct 18460 TTAACGATGTCGAAGCCCGCCGCGCCCCCGAACGTGCTCGGCTTCCAGTACACCGGCGAG 18519 Query 8801 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTC 8860 |||||| |||| ||| ||| || |||||||| ||||| ||||||| ||| | |||||| Sbjct 18520 CAGATGGGGTTCCCCAGGAGACCCTTGAGGGAGAACGGGGCCCCCATCTCCACCATGCTC 18579 Query 8861 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACA 8920 || |||||||||||| || || | | |||| || | || | ||| ||||||| Sbjct 18580 TCGCCGAAGATGGCGCTGTCGCGCGTCCGCTCCAGCAGCAGGCCCGGGTAGAACTCCAGC 18639 Query 8921 GCCTCGATGTCTCCGTAAAG 8940 || |||||||| ||||| || Sbjct 18640 GCGTCGATGTCCCCGTACAG 18659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704739267128880