Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq349548 127 1e-24 seq152460 127 1e-24 seq52333 123 2e-23 seq390644 113 3e-20 seq4123 113 3e-20 seq960 113 3e-20 seq320004 109 4e-19 seq3925 109 4e-19 seq332899 104 2e-17 seq327091 104 2e-17 seq146746 104 2e-17 seq130880 104 2e-17 seq319090 89.7 3e-13 seq88666 89.7 3e-13 seq26574 87.8 1e-12 seq62895 84.2 1e-11 >seq349548 Length=297 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 171 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 112 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 111 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 77 >seq152460 Length=160 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 49 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 108 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 109 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 143 >seq52333 Length=241 Score = 123 bits (136), Expect = 2e-23 Identities = 83/93 (89%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 135 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 194 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | |||| |||||||||||||||||||||||||| Sbjct 195 TCATCCATTCATGCGCGTCACTAATTAGATGAC 227 >seq390644 Length=1039 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| |||||||| ||||| || |||||||| Sbjct 270 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 329 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||| ||||||||||||||||||||| Sbjct 330 TCATCCATTCATAAGCGTCACTAATTAGATGACGA 364 >seq4123 Length=86638 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||| |||| ||||| || |||||||| Sbjct 57124 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGTAGGTAGGGACAGTGGGAATCTCGT 57183 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||| |||||||||||||||||||| Sbjct 57184 TCATCCATTCATGGACGTCACTAATTAGATGACGA 57218 >seq960 Length=635388 Score = 113 bits (124), Expect = 3e-20 Identities = 128/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 ||||||| || | ||| || || || || || || ||||| ||||| ||| ||| |||| Sbjct 333548 ACCCGACCAAGTTTTTTGGCTGTGAGCTGGGAGCGCAGACCCAGTTCGATGCCAAGAACG 333489 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | ||||||||||| ||||| || || | | |||||| |||||| | || ||||| | Sbjct 333488 ACCGCTTCATCGTCAACGGGTCCCACGAGGCCAACAAGCTCCAGGACATGCTGGACGGGT 333429 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 | || | ||||| |||||||||| || ||||| ||||| || || || || Sbjct 333428 TCATCAGGAAGTTCGTGCTGTGTCCCGAGTGCGACAACCCAGAAACTGACCT 333377 >seq320004 Length=1049 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| |||||||| ||||| || |||||| | Sbjct 773 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTCAT 714 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||| ||||||||||||||||||||| Sbjct 713 TCATCCATTCATAAGCGTCACTAATTAGATGACGA 679 >seq3925 Length=17790 Score = 109 bits (120), Expect = 4e-19 Identities = 78/90 (87%), Gaps = 5/90 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| ||||||||| | |||||||| ||||| || |||||||| Sbjct 17417 AAGCCCGTTCCCTTGGCAGTGGTTTCGTTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 17476 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGAT 25986 | |||| ||||||||||||||||||||||| Sbjct 17477 TCATCCATTCATGCGCGTCACTAATTAGAT 17506 >seq332899 Length=406 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 136 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 195 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 196 GCCAGTATTTAGCCTTA 212 >seq327091 Length=959 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 830 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 889 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 890 GCCAGTATTTAGCCTTA 906 >seq146746 Length=220 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 82 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 23 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 22 GCCAGTATTTAGCCTTA 6 >seq130880 Length=435 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 334 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 393 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 394 GCCAGTATTTAGCCTTA 410 >seq319090 Length=407 Score = 89.7 bits (98), Expect = 3e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 155 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCG 213 >seq88666 Length=632 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 37 CTCCCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 96 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||| ||| Sbjct 97 GCCGGTATTTAGCTTTA 113 >seq26574 Length=291 Score = 87.8 bits (96), Expect = 1e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTC 20004 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 199 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTC 142 >seq62895 Length=114 Score = 84.2 bits (92), Expect = 1e-11 Identities = 61/71 (86%), Gaps = 5/71 (7%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 44 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 103 Query 25957 TAATCCTTTCA 25967 | |||| |||| Sbjct 104 TCATCCATTCA 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333202370750837