Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq742 113 4e-20 >seq742 Length=2242023 Score = 113 bits (124), Expect = 4e-20 Identities = 175/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 24976 GATAATTTGTACAAAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCA 25035 |||| ||| | ||| |||| ||||| || || || ||||| | ||||| || ||| Sbjct 1678256 GATATTTTTTTTAAAGTTGAACCATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCA 1678315 Query 25036 TCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACA 25095 |||| | || |||||| | ||||| |||||| ||||| || ||| |||| Sbjct 1678316 TCACCCTGGAGGTGGAGCCTAGCGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACA 1678375 Query 25096 AAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155 | ||||| || || || || || ||| || | || || |||||||| || | ||||||| Sbjct 1678376 AGGAAGGCATCCCCCCAGATCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATG 1678435 Query 25156 ATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGC 25215 ||||| || ||| ||||| || || ||||||||||| || ||| | || || | | Sbjct 1678436 GGCGCACCCTGTCCGACTACAACATCCAGAAAGAATCCACCCTTCATCTTGTCCTGCGTC 1678495 Query 25216 TAAGAGGAGG 25225 | || ||||| Sbjct 1678496 TGAGGGGAGG 1678505 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 24994 GAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 |||| ||||| || ||||| || || |||| || || ||||||| | || |||||| Sbjct 1675054 GAACCATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACCATCACCCTTGAGGTGGAGC 1675113 Query 25054 CGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 | |||||| || || | || |||| || | || ||||| ||||| ||||| | Sbjct 1675114 CCAGTGACACCATAGAA--AATGTTAAAGCTAAGATCCAG-GACAAGGAAGGCATTCCCC 1675170 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170 | || || ||| || | || || |||||||| || | ||||||| ||||| || | Sbjct 1675171 CAGATCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTG 1675230 Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| || || ||||||||||| || ||| | || || Sbjct 1675231 ACTACAACATCCAGAAAGAATCCACCCTCCATCTTGTCCT 1675270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 431070678939005