Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_008464.1 Length=60238 Score E Sequences producing significant alignments: (Bits) Value seq300558 176 2e-39 seq266300 105 3e-18 >seq300558 Length=1001 Score = 176 bits (194), Expect = 2e-39 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 46658 CGTCGACAGCTTCACGAAACATCTTTTCATCGCCAATAAAAGTGGCGATAGTGAATTTAG 46717 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 704 CGTCGACGGCTTCACGAAACATCTTTTCATCGCCAATAAAAGTGGCGATAGTGAATTTAG 645 Query 46718 TCTGGATAGCCATAAGTGTTTGATCCATTTTTTGGGACTCCT 46759 ||||||||||||||||||||||||||||| |||||||||||| Sbjct 644 TCTGGATAGCCATAAGTGTTTGATCCATTCTTTGGGACTCCT 603 Score = 89.7 bits (98), Expect = 2e-13 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 40169 CAATAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCG 40220 ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52 CAAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCG 1 >seq266300 Length=503 Score = 105 bits (116), Expect = 3e-18 Identities = 63/66 (95%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 40219 CGAATATTGGTTACTTCTGCATGTGCTATCTGCGCCCATATCATCCAGTGGTCATAGCAG 40278 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 503 CGAATATTGGTTACGTCTGCATGTGCTATCTGCGCCCATATCATCCAGTGGTCGTAGCAG 444 Query 40279 TCATTG 40284 || ||| Sbjct 443 TCGTTG 438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191662217994800