Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq742 89.7 4e-13 >seq742 Length=2242023 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 111178 AGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACG 111237 |||| || ||||| || ||||||||||| |||| ||||| ||||| ||| | || | Sbjct 1675050 AGTTGAACCATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACCATCACCCTTGAGGTG 1675109 Query 111238 GAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCC 111297 || ||||| || | | | | || ||| || || ||||| |||||| ||||| Sbjct 1675110 GAGCCCAGTGACACCATAGAAAATGTTAAAGCTAAGATCCAGGACAAGGAAGGCATTCCC 1675169 Query 111298 GTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCC 111357 ||||| || ||||| || | || ||||| || |||||||| || || | Sbjct 1675170 CCAGATCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCT 1675229 Query 111358 GATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111414 || || || || || |||||||| || || ||| | || | |||||| | |||||| Sbjct 1675230 GACTACAACATCCAGAAAGAATCCACCCTCCATCTTGTCCTTCGTCTGAGGGGTGGC 1675286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420836271873400