Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq380429 84.2 2e-11 seq367448 84.2 2e-11 seq356943 84.2 2e-11 seq167005 84.2 2e-11 seq742 82.4 6e-11 >seq380429 Length=606 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/86 (85%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 114389 |||||||| ||||||||||| |||| |||||||||||| | | || || ||| |||||| Sbjct 196 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGG-GTGAGCGATCAAAGGAA 254 Query 114390 CCAAAACTGATATATTGAGCCATTCG 114415 ||| ||||||| || ||||||||||| Sbjct 255 CCATAACTGATTTAATGAGCCATTCG 280 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/86 (85%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 115586 |||||||| ||||||||||| |||| |||||||||||| | | || || ||| |||||| Sbjct 196 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGG-GTGAGCGATCAAAGGAA 254 Query 115587 CCAAAACTGATATATTGAGCCATTCG 115612 ||| ||||||| || ||||||||||| Sbjct 255 CCATAACTGATTTAATGAGCCATTCG 280 >seq367448 Length=431 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/85 (85%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGGAAC 114390 |||||||| ||||||||||| |||| |||||||||||||| | | |||| ||||||| Sbjct 264 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGGAAC 323 Query 114391 CAAAACTGATATATTGAGCCATTCG 114415 || ||||||| || ||||||||||| Sbjct 324 CATAACTGATTTAATGAGCCATTCG 348 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/85 (85%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGGAAC 115587 |||||||| ||||||||||| |||| |||||||||||||| | | |||| ||||||| Sbjct 264 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGGAAC 323 Query 115588 CAAAACTGATATATTGAGCCATTCG 115612 || ||||||| || ||||||||||| Sbjct 324 CATAACTGATTTAATGAGCCATTCG 348 >seq356943 Length=570 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/86 (85%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 114389 |||||||| ||||||||||| |||| |||||||||||| | | || || ||| |||||| Sbjct 239 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGG-GTGAGCGATCAAAGGAA 297 Query 114390 CCAAAACTGATATATTGAGCCATTCG 114415 ||| ||||||| || ||||||||||| Sbjct 298 CCATAACTGATTTAATGAGCCATTCG 323 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/86 (85%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 115586 |||||||| ||||||||||| |||| |||||||||||| | | || || ||| |||||| Sbjct 239 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGG-GTGAGCGATCAAAGGAA 297 Query 115587 CCAAAACTGATATATTGAGCCATTCG 115612 ||| ||||||| || ||||||||||| Sbjct 298 CCATAACTGATTTAATGAGCCATTCG 323 >seq167005 Length=214 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/86 (85%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 115586 |||||||| ||||||||||| |||| |||||||||||| | | || || ||| |||||| Sbjct 92 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGG-GTGAGCGATCAAAGGAA 34 Query 115587 CCAAAACTGATATATTGAGCCATTCG 115612 ||| ||||||| || ||||||||||| Sbjct 33 CCATAACTGATTTAATGAGCCATTCG 8 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/86 (85%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 114389 |||||||| ||||||||||| |||| |||||||||||| | | || || ||| |||||| Sbjct 92 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGG-GTGAGCGATCAAAGGAA 34 Query 114390 CCAAAACTGATATATTGAGCCATTCG 114415 ||| ||||||| || ||||||||||| Sbjct 33 CCATAACTGATTTAATGAGCCATTCG 8 >seq742 Length=2242023 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| ||||| || |||||||| ||| || ||||| |||||||| || | | Sbjct 1678505 CCTCCCCTCAGACGCAGGACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAC 1678446 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | ||| | || |||| ||||||||||| || ||||| | ||||||||| Sbjct 1678445 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATC 1678393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394993996116454