Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_010956.1 Length=35083 Score E Sequences producing significant alignments: (Bits) Value seq272266 347 3e-91 seq213072 333 6e-87 seq256110 264 3e-66 seq295602 96.9 8e-16 >seq272266 Length=497 Score = 347 bits (384), Expect = 3e-91 Identities = 382/500 (76%), Gaps = 10/500 (2%) Strand=Plus/Plus Query 6272 ACCTCGCCGCGCAGGGGCTCGTTGGTCCAGCAGAGTCTGCCGCCCTTGCGCGAGCAGAAC 6331 ||||| ||||| ||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct 4 ACCTCTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAAT 63 Query 6332 GGGGGCAGCACATCAAGCAGATGCTCGTCAGGGGGGTCCGCATCGATGGTGAAGATGCCC 6391 || || || || ||| | |||||| |||||||| || || | ||| |||| ||| Sbjct 64 GGCGGTAGGGGGTCTAGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGAC-CCC 122 Query 6392 GGACAG-AGTTCCTTGTCAAAATAATCGATTTTTGAGGATGCAT-CA--TCCAAGGCCAT 6447 || ||| || | ||| || || || || || | || | | || || | ||| Sbjct 123 GGGCAGCAGGCGCGCGTCGAAGTAGTCTATCTT---GCATCCTTGCAAGTCTAGCGCCTG 179 Query 6448 CTGCCACTCGCGGGCGGCCAGCGCTCGCTCGTAGGGGTTGAGGGGCGGACCCCAGGGCAT 6507 |||||| |||||||||| ||||| |||||||| |||||||| || |||||||| ||||| Sbjct 180 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 239 Query 6508 GGGATGAGTGAGGGCGGAGGCGTACATGCCGCAGATGTCGTAGACATAGATGGGCTCCGA 6567 ||| || ||||| |||||||||||||||||||| |||||||| || | || |||||| Sbjct 240 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACGT-GAGGGGCTCTCT 298 Query 6568 GAGGATGCCGATGTAGGTGGGATAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTC 6627 ||| || || | || || || || || | || ||||||||||||||||||||||| || Sbjct 299 GAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 358 Query 6628 ATACAACTCGTGCGAGGGGGCCAAGAAGGCGGGGCCGAGATTGGTGCGCTGGGGCTGCTC 6687 || | ||||||||||| || | || | |||| ||||| ||| | || ||||||||| Sbjct 359 GTATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 418 Query 6688 GGCGCGGAAGACGATCTGGCGAAAGATGGCGTGCGAGTTGGAGGAGATGGTGGGCCGTTG 6747 || |||||| | ||||| | |||||||| || |||||||| || ||||| || || || Sbjct 419 TGCTCGGAAG-CTATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTG 477 Query 6748 GAAGATGTTAAAGTGGGCGT 6767 ||||| ||| ||| ||||| Sbjct 478 GAAGACGTTGAAGCTGGCGT 497 >seq213072 Length=511 Score = 333 bits (368), Expect = 6e-87 Identities = 282/342 (82%), Gaps = 4/342 (1%) Strand=Plus/Plus Query 5927 TCGGCACTCAGGTTGTCAGTTTCTAGAAACGAGGAGGATTTGATGTTGGCTTGCCCTGCC 5986 || || || || ||||||||||| | |||||||||||||||||| || | || || || Sbjct 174 TCTGCGCTAAGATTGTCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGCG 233 Query 5987 GCGATGCTTTTTAGGAGACTTTCATCCATCTGGTCAGAAAAGACTAtttttttATTGTCA 6046 | ||||| ||| ||| |||||||||||||||||||| | || ||||| | |||| Sbjct 234 GTGATGCCTTTGAGGGTGGCCGCATCCATCTGGTCAGAAAAG-CAATCTTTTTGT-GTCA 291 Query 6047 AGCTTGGTGGCGAAGGAGCCATAGAGGGCGTTGGATAGAAGCTTGGCGATGGATCTCATG 6106 ||||||||||| || || || |||||||||||||| || | |||||||||||| | || | Sbjct 292 AGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGG 351 Query 6107 GTCTGATTTTTGTCACGGTCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGGACATACTCG 6166 || || |||||| | || |||||||||||||||||||||||||||||||| || || ||| Sbjct 352 GTTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCG 410 Query 6167 CGCGCGACGCACTTCCATTCGGGGAAGACGGTGGTGCGCTCGTCGGGCACGATCCTGACG 6226 ||||| |||||| ||||||||| |||||||||||||||||||||||||| | ||| Sbjct 411 CGCGCAACGCACCGCCATTCGGG-AAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCACG 469 Query 6227 CGCCAGCCGCGGTTATGCAGGGTGACCAGGTCCACGCTGGTG 6268 ||||| |||||||| ||||||||||| ||||| ||||||||| Sbjct 470 CGCCAACCGCGGTTGTGCAGGGTGACAAGGTCAACGCTGGTG 511 >seq256110 Length=496 Score = 264 bits (292), Expect = 3e-66 Identities = 271/353 (77%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 10749 GAGGGCGAAGGGCTGGCGAGACTGGGGGCGCCGTCCCCGGAGCGACACCCCCGCGTGCAG 10808 |||||||| || |||||| | || || ||||| || || ||||| ||||| | |||||| Sbjct 355 GAGGGCGAGGGCCTGGCGCGGCTAGGAGCGCCCTCTCCTGAGCGGCACCCAAGGGTGCAG 296 Query 10809 CTGCAGAAGGACGTGCGCCCGGCGTACGTGCCTGCGCAGAACCTGTTCAGGGACCGCAGC 10868 ||| || || ||| |||||||||||| |||||||||||| | |||||| Sbjct 295 CTGAAGCGTGATACGCGTGAGGCGTACGTGCCGCGGCAGAACCTGTTTCGCGACCGCGAG 236 Query 10869 GGGGAGGAGCCCGAGGAGATGCGCGACTGCCGGTTTCGGGCGGGCAGGGAGCTGCGCGAG 10928 || |||||||||||||||||||| || | ||| | || || | |||||||| | Sbjct 235 GGAGAGGAGCCCGAGGAGATGCGGGATCGAAAGTTCCACGCAGGGCGCGAGCTGCGGCAT 176 Query 10929 GGCCTGGACCGCCAGCGCGTGCTGCGCGACGAGGATTTCGAGCCGAACGAGCAGACGGGG 10988 |||||| | ||| |||| |||||||||| ||||| || ||||| ||| || || ||| Sbjct 175 GGCCTGAATCGCGAGCGGTTGCTGCGCGAGGAGGACTTTGAGCCCGACGCGCGAACCGGG 116 Query 10989 ATCAGCCCCGCGCGCGCTCACGTGGCGGCGGCCAACCTGGTGACGGCCTACGAGCAGACG 11048 || || ||||||||||| ||||||||||| ||| ||||||| || || |||||||||||| Sbjct 115 ATTAGTCCCGCGCGCGCACACGTGGCGGCCGCCGACCTGGTAACCGCATACGAGCAGACG 56 Query 11049 GTGAAGCAGGAGCGCAACTTCCAAAAGAGTTTCAACAACCACGTGCGCACCCT 11101 ||||| |||||| |||||| ||| || || |||||||||||||| || || Sbjct 55 GTGAACCAGGAGATTAACTTC--AAAAAGCTTTAACAACCACGTGCGTACGCT 5 >seq295602 Length=499 Score = 96.9 bits (106), Expect = 8e-16 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 14559 CACGCTGTACCGCAGTTGGTACCTGTCCTATACCTACGGGGACCCCGAGAAGGGGGTGCA 14618 ||| | ||||||||| |||||||| | || | |||||| ||||| ||| || | | Sbjct 364 CACCCAGTACCGCAGCTGGTACCTTGCATACAACTACGGCGACCCTCAGACCGGAATCCG 423 Query 14619 GTCGTGGACGCTGCTCACCACCCCGGACGTCACCTGCGGCGCGGAGCAAGTCTACTGGTC 14678 || ||||| ||||| ||| || ||||| ||||||||| ||||||| ||||||||||| Sbjct 424 CTCATGGACCCTGCTTTGCACTCCTGACGTAACCTGCGGCTCGGAGCAGGTCTACTGGTC 483 Query 14679 GCTGCC 14684 | |||| Sbjct 484 GTTGCC 489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111574791189830