Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_011203.1 Length=35343 Score E Sequences producing significant alignments: (Bits) Value seq213072 233 4e-57 seq272266 232 2e-56 seq256110 230 5e-56 seq295602 96.9 8e-16 >seq213072 Length=511 Score = 233 bits (258), Expect = 4e-57 Identities = 260/342 (76%), Gaps = 4/342 (1%) Strand=Plus/Plus Query 5976 TCTGCACTCAGGTTGTCAGTTTCTAGGAACGAGGAGGATTTGATATTGACAGTACCAGCA 6035 ||||| || || ||||||||||| | |||||||||||||||||||| || || || Sbjct 174 TCTGCGCTAAGATTGTCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGCG 233 Query 6036 GAGATGCCTTTCATAAGACTCTCGTCCATCTGGTCAGAAAACACAATCTTCTTGTTGTCC 6095 | ||||||||| | | | ||||||||||||||||| ||||||| |||| ||| Sbjct 234 GTGATGCCTTTGAGGGTGGCCGCATCCATCTGGTCAGAAAAG-CAATCTTTTTGT-GTCA 291 Query 6096 AGCTTGGTGGCAAATGATCCATAGAGGGCATTGGATAGAAGCTTGGCGATGGAGCGCATG 6155 |||||||||||||| || || |||||||| ||||| || | ||||||||||||||||| | Sbjct 292 AGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGG 351 Query 6156 GTTTGGTTCTTTTCCTTGTCCGCGCGCTCCTTGGCGGTGATGTTAAGCTGGACGTACTCG 6215 |||||||| ||| | || |||||||||||||| | |||||| ||||| ||||| ||| Sbjct 352 GTTTGGTT-TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCG 410 Query 6216 CGCGCCACACATTTCCATTCAGGAAAGATGGTTGTCAGTTCATCCGGAACTATTCTGATT 6275 ||||| || || |||||| || |||| ||| || | || || || || | | Sbjct 411 CGCGCAACGCACCGCCATTC-GGGAAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCACG 469 Query 6276 CGCCATCCCCTATTGTGCAGGGTTATCAGATCCACACTGGTG 6317 ||||| || | ||||||||||| | || || || |||||| Sbjct 470 CGCCAACCGCGGTTGTGCAGGGTGACAAGGTCAACGCTGGTG 511 >seq272266 Length=497 Score = 232 bits (256), Expect = 2e-56 Identities = 349/492 (71%), Gaps = 13/492 (3%) Strand=Plus/Plus Query 6321 ACCTCGCCTCGGAGGGGCTCATTGGTCCAGCAGAGTCGACCTCCTTTTCTTGAACAGAAA 6380 ||||| || || ||| |||| |||||||||||||| || || || || | || ||||| Sbjct 4 ACCTCTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAAT 63 Query 6381 ggggggagggggTCTAGCATGAACTCATCAGGGGGGTCCGCATCTATGGTAAATATTCCC 6440 || || |||||||||||| ||| || |||||||| || || | |||||| | || Sbjct 64 GGCGGTAGGGGGTCTAGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCG 123 Query 6441 GGTAGCAAATCTTTGTCAAAATAGCTGATGGTGGCGGGATCATC-CAAG------GTCAT 6493 || |||| ||| || ||| || || ||| | |||| | | Sbjct 124 GGCAGCAGGCGCGCGTCGAAGTAGTCTATCTTGC----ATCCTTGCAAGTCTAGCGCCTG 179 Query 6494 CTGCCATTCTCGAACTGCCAGCGCGCGCTCATAGGGGTTAAGAGGGGTGCCCCAGGGCAT 6553 ||||||| | || | || ||||||||||| || ||||| || |||| ||||| ||||| Sbjct 180 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 239 Query 6554 GGGGTGGGTGAGCGCGGAGGCATACATGCCACAGATATCGTAGACATAGAGGGGCTCTTC 6613 ||||||||||||||||||||| |||||||| || || ||||| || | |||||||||| Sbjct 240 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACGT-GAGGGGCTCTCT 298 Query 6614 GAGGATGCCGATGTAAGTGGGATAACATCGCCCCCCTCTGATGCTTGCTCGCACATAGTC 6673 ||| || || | || || || || |||| || || | |||||| || ||||| || || Sbjct 299 GAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 358 Query 6674 ATAGAGTTCATGTGAGGGGGCAAGAAGACCCGGGCCCAGATTGGTGCGGTTGGGTTTTTC 6733 || ||||| || ||||| || || || | || || || ||| | ||| ||| | || Sbjct 359 GTATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 418 Query 6734 CGCCCTGTAAACGATCTGGCGAAAGATGGCATGGGAATTGGAAGAGATAGTAGGTCTCTG 6793 || | | || | ||||| | ||||||||||| || ||||| || || || || | ||| Sbjct 419 TGCTC-GGAAGCTATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTG 477 Query 6794 GAATATGTTAAA 6805 ||| | ||| || Sbjct 478 GAAGACGTTGAA 489 >seq256110 Length=496 Score = 230 bits (254), Expect = 5e-56 Identities = 276/367 (75%), Gaps = 6/367 (2%) Strand=Plus/Minus Query 11001 CTGGACTTGGAAGAGGGCGAGGGATTGGCGCGCCTGGGGGCTCCATCGCCCGAGCGGCAC 11060 ||||||||||| ||||||||||| ||||||| || || || || || || ||||||||| Sbjct 367 CTGGACTTGGAGGAGGGCGAGGGCCTGGCGCGGCTAGGAGCGCCCTCTCCTGAGCGGCAC 308 Query 11061 CCGCGGGTGCAACTAAAAAAGGACTCTCGCGAGGCGTACGTGCCCCAGCAGAACCTGTTC 11120 || ||||||| || || || | || |||||||||||||| | |||||||||||| Sbjct 307 CCAAGGGTGCAGCTGAAGCGTGATACGCGTGAGGCGTACGTGCCGCGGCAGAACCTGTTT 248 Query 11121 AGGGACAG-GAGCGGCGAGGAGCCAGAGGAGATGCGAGCATCTCGA-TTTAACGCGGGTC 11178 | ||| | ||| || |||||||| ||||||||||| | ||| | || |||| || | Sbjct 247 CGCGACCGCGAG-GGAGAGGAGCCCGAGGAGATGCG-GGATCGAAAGTTCCACGCAGGGC 190 Query 11179 GCGAGCTGCGCCACGGTCTGGATCGAAGACGGGTGCTGCAAGACGAGGATTTTGAGGTCG 11238 |||||||||| || || ||| |||| ||| |||||| || ||||| |||||| || Sbjct 189 GCGAGCTGCGGCATGGCCTGAATCGCGAGCGGTTGCTGCGCGAGGAGGACTTTGAGCCCG 130 Query 11239 ATGAAGTCACAGGGATCAGCCCAGCTAGGGCACATGTGGCCGCGGCCAACCTAGTCTCGG 11298 | | || ||||| || || || | ||||| ||||| || ||| |||| || | | Sbjct 129 ACGCGCGAACCGGGATTAGTCCCGCGCGCGCACACGTGGCGGCCGCCGACCTGGTAACCG 70 Query 11299 CCTACGAGCAGACCGTGAAGGAGGAGCGCAACTTCCAAAAATCTTTTAACAACCATGTGC 11358 | ||||||||||| ||||| ||||| ||||| |||||| | ||||||||||| |||| Sbjct 69 CATACGAGCAGACGGTGAACCAGGAGATTAACTT-CAAAAAGC-TTTAACAACCACGTGC 12 Query 11359 GCACCCT 11365 | || || Sbjct 11 GTACGCT 5 >seq295602 Length=499 Score = 96.9 bits (106), Expect = 8e-16 Identities = 100/130 (77%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 15030 TACCGCAGTTGGTACCTGTCCTACAATTACGGTAACCCTGAGAAAGGAATAAGGTCTTGG 15089 |||||||| |||||||| | ||||| ||||| ||||| ||| ||||| | || ||| Sbjct 371 TACCGCAGCTGGTACCTTGCATACAACTACGGCGACCCTCAGACCGGAATCCGCTCATGG 430 Query 15090 ACACTGCTCACCACTTCAGATGTCACCTGTGGGGCAGAGCAGGTCTACTGGTCGCTCCCT 15149 || ||||| |||| | || || ||||| || | |||||||||||||||||| | || Sbjct 431 ACCCTGCTTTGCACTCCTGACGTAACCTGCGGCTCGGAGCAGGTCTACTGGTCGTTGCCA 490 Query 15150 GACATGATGC 15159 | |||||||| Sbjct 491 G-CATGATGC 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112402568211070