Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq742 138 1e-27 >seq742 Length=2242023 Score = 138 bits (152), Expect = 1e-27 Identities = 185/257 (72%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 46337 AATTAAAACATTTGTGTACTATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAAT 46396 |||||||| ||| | | | | | | | |||||| || | ||||| || ||||| | Sbjct 1678532 AATTAAAATATTGGAGAAAT---TCACTGGCCTCCCCTCAGACGCAGGACAAGATGAAGG 1678476 Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || || || ||||| ||||||||||| || |||||| | || || |||||||||||| Sbjct 1678475 GTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCG 1678416 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| |||| | |||||| || | || | || ||||||||| |||||| ||| Sbjct 1678415 GCGAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 1678356 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | || | | |||||||| | ||||| |||| |||||||| ||||| || || || Sbjct 1678355 ACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 1678296 Query 46577 TTAACAAAGATTTGCAT 46593 || || ||||| ||||| Sbjct 1678295 TTGACGAAGATCTGCAT 1678279 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| |||||||| || || |||||| | || || ||||||||||||||||| Sbjct 1675249 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAG 1675190 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | |||||| || | || | || ||||||||| |||||| || | | Sbjct 1675189 ATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCTTTAACATTT 1675130 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || | ||||| || | |||||||| ||||| ||||| ||||| ||| Sbjct 1675129 TCTATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTTTTGACA 1675070 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 1675069 AAGATCTGCAT 1675059 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | || ||||| | || || || ||||| |||||||| || Sbjct 1667616 CCTCCCCTCAGACGAAGGACAAGATGGAGGGTCGATTCTTTCTGGATGTTGTAGTCAGAC 1667557 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || |||||| | || || ||||||||||||||||| |||| | |||||| || | || Sbjct 1667556 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGG 1667497 Query 46487 ACGCTCTCCTTGTCCATGATCTT 46509 | || ||||||||| |||||| Sbjct 1667496 ATGCCTTCCTTGTCCTGGATCTT 1667474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562218423080040