Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_014564.2 Length=45413 Score E Sequences producing significant alignments: (Bits) Value seq213072 91.5 4e-14 >seq213072 Length=511 Score = 91.5 bits (100), Expect = 4e-14 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 8901 GTGTCCATGTTGGTGGCGAAGGCGCCGTAGAGGGCGTTGCTGAGCATCTTGGAGATGGAG 8960 ||||| | |||||||| || | ||||||||||||||| |||| ||||| ||||||| Sbjct 286 GTGTCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAG 345 Query 8961 CGCATGACCTCGTTCTTCTCGCGGTCGGCCTTTTCCTTGGCGCGGATGTTGATGCTG-AC 9019 |||| | | ||| || |||| ||||| |||||||| |||||| | |||| || Sbjct 346 CGCAGGGTTTGGTT-TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTA-GCTGCAC 403 Query 9020 GTACTCG-GCGCAGATGGGCTTCCACTCGGGGAAGACGATGTTCATCCCGTCCTGGAGGA 9078 ||| ||| ||||| | | | ||| || ||||||||| || | | |||| | | | Sbjct 404 GTATTCGCGCGCA-ACGCACCGCCATTC-GGGAAGACGGTGGTGCGCTCGTCGGGCACCA 461 Query 9079 CGGTG-ACGGTCCACCCGCGGTTGTGGAGCGTGA 9111 |||| ||| ||| ||||||||||| || |||| Sbjct 462 -GGTGCACGCGCCAACCGCGGTTGTGCAGGGTGA 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144463008995250