Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq5353 150 7e-31 >seq5353 Length=2895058 Score = 150 bits (166), Expect = 7e-31 Identities = 450/694 (65%), Gaps = 3/694 (0%) Strand=Plus/Minus Query 450912 TAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAA 450971 || |||| || |||||| | || ||||||| || ||||| ||||| | ||| |||| | Sbjct 2261977 TATCAATAGGCATTGATTTGGGCACCACCTACTCCTGTGTGGGTGTATTCCAGCATGGCA 2261918 Query 450972 ATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTA 451031 | || || ||||| ||||||||||| ||| || || || || | || ||| | Sbjct 2261917 AAGTGGAGATTATCGCAAATGACCAGGGAAACCGCACCACACCGAGCTATGTGGCTTTCA 2261858 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAA 451091 |||||||| || || | || | ||||| ||| ||| || | | Sbjct 2261857 ACGATTCAGAGAGGCTCATTGGAGATGCTGCGAAAAACCAGGTGGCCATGAACCCTTCCA 2261798 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 ||||| | | ||||| || || |||||||| | | || |||||| | | ||| || Sbjct 2261797 ACACAATCTTCGATGCCAAGCGCTTAATTGGTAGAAAGTTTGATGACCAAATTGTGCAGG 2261738 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 || | || | | ||| | || | | | || ||||||||| | | |||| Sbjct 2261737 CTGACATGAAGCTGTGGCCTTTCAAGGTCATCAGCGATAACGGAAAGCCCAAAGTCCAAG 2261678 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271 | | || || || || || || ||| || ||||| || || ||||||||||| Sbjct 2261677 TGGAGTACAAGGGGGAGACCAAGGATTTCTTCCCAGAAGAGATCTCCTCTATGGTTCTGG 2261618 Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331 |||||||| || | ||| || || | || | || || ||||||| || | Sbjct 2261617 TCAAAATGAAGGAGATAGCTGAGGCCTACTTGGGGCAACGGGTGTCTAATGCAGTCATCA 2261558 Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391 | || || ||||| || ||||| | || ||||||| || || ||||| || |||| Sbjct 2261557 CCGTCCCAGCTTACTTTAATGACTCCCAGAGGCAAGCTACCAAGGATGCCGGGGTTATTT 2261498 Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451 | || | ||||| || || || || ||||| || |||||||| ||| | || ||||| | Sbjct 2261497 CAGGCCTGAATGTGCTACGGATCATCAATGAGCCGACAGCAGCGGCTATCGCCTATGGTC 2261438 Query 451452 TAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAA 451511 | | ||| | | ||| |||||| | |||| | || | ||||| | |||||||| | Sbjct 2261437 TTGACAAAGCCA---AAAAAGAAGAGAGAAATGTCCTAATCTTTGACCTGGGTGGAGGTA 2261381 Query 451512 CTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATG 451571 | || || || || | ||||| ||||| | || || |||||| | ||| | Sbjct 2261380 CCTTCGACGTGTCCGTCCTCACCATTGAGGATGGCATCTTCGAGGTAAAGTCCACCGCAG 2261321 Query 451572 GTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | || || ||||| || || || || |||| || Sbjct 2261320 GAGACACGCATCTGGGCGGGGAGGACTTTGACAA 2261287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1964898559084116