Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5389 105 8e-18 seq86275 93.3 5e-14 seq48740 93.3 5e-14 seq31255 93.3 5e-14 seq21991 93.3 5e-14 seq19112 93.3 5e-14 seq91252 89.7 6e-13 seq19950 89.7 6e-13 seq6215 89.7 6e-13 seq2259 89.7 6e-13 seq976 87.8 2e-12 seq3564 86.0 7e-12 seq261753 84.2 3e-11 seq248709 84.2 3e-11 seq38716 84.2 3e-11 >seq5389 Length=131951 Score = 105 bits (116), Expect = 8e-18 Identities = 262/385 (68%), Gaps = 12/385 (3%) Strand=Plus/Minus Query 110283 GAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAAT 110342 ||| || || || || || |||||||| | |||||| | |||||| || | || Sbjct 37482 GAGCGCGATGGAGGCCAGGTTGCACACGGCGACCTCGTCCCCGCTGGTGTACTCGATGAT 37423 Query 110343 TTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT 110402 ||||| |||| |||| ||| ||| |||| ||||| ||| || ||| ||| Sbjct 37422 CTCCGTGCACAGGTTGCTGGACTTGATGCAGCCCAGGTTCTGCTGGTTGCTCTTGCGGTT 37363 Query 110403 GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGC 110462 ||| || ||||| ||||||||||| || || || || |||||||| |||| || ||||| Sbjct 37362 GCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCCGTCTCCGTCTGCGACTCGATGATGGC 37303 Query 110463 CTTCCATACAT-CGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGG 110521 | ||| || | | | | | || || || || || || ||||||| || Sbjct 37302 GTGCCACACCTGCTGTGCCTTCACCACGCGC-TTGGCCTTGCCCGCCGCCTCGTAGCCGG 37244 Query 110522 TGTACAAGTCCTCAAATTCCTGTCCGTA-CACATCAGAAAGACCCTTCGC-CTTGTCGGG 110579 |||||| | |||||| |||| || | ||| || || ||| || | || ||| Sbjct 37243 TGTACAGCTTCTCAAACTCCTCCCCCCAGCAC-TCGTCCAG-CCCGGGGCAGTCGTTGGG 37186 Query 110580 ACAGAAGAGGGACCAATTTCCACCCT--CCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 || | |||||||| |||| | ||| |||||||||||||||||||| || ||| Sbjct 37185 GCACATCAGGGACCA--TTCCTGGTTGGACTCCACCCTCTTCATGAACAGGTCGGGGATC 37128 Query 110638 CACATCGCCG-AGAAAAGGTCACGG 110661 ||||| |||| |||| ||||| ||| Sbjct 37127 CACAT-GCCGTAGAACAGGTCGCGG 37104 >seq86275 Length=169 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| Sbjct 155 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACGGGTTCAACCCCCGT 97 >seq48740 Length=288 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| Sbjct 222 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACGGGTTCAACCCCCGT 164 >seq31255 Length=174 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| Sbjct 30 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACGGGTTCAACCCCCGT 88 >seq21991 Length=345 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| Sbjct 314 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACGGGTTCAACCCCCGT 256 >seq19112 Length=137 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| Sbjct 134 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACGGGTTCAACCCCCGT 76 >seq91252 Length=325 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct 98 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATACCCGT 156 >seq19950 Length=330 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 || |||||||||||||||||||||||| |||||||||||||||||||||| | |||||| Sbjct 42 TAACTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACGGGTTCAACCCCCGT 100 >seq6215 Length=466578 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct 276239 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATACCCGT 276297 >seq2259 Length=267093 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct 8411 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATACCCGT 8469 >seq976 Length=124222 Score = 87.8 bits (96), Expect = 2e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||||||||||| | ||| Sbjct 124179 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACGGGTTCAACCCC 124124 >seq3564 Length=3914096 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||||||||| | |||||||| || | |||| ||||| || ||||| || || ||||| Sbjct 3071813 GTAGATGTTGCTGGTGTAGGGCTCAATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGA 3071754 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTC 109846 || |||||||||||||||| || |||||||||| Sbjct 3071753 GGCGGTGGGCATGGGAGCCAGCAGCAGACTGTTTC 3071719 >seq261753 Length=544 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT- 136775 |||| |||| |||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct 276 TAGCCCAGTCTGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATACCCGTA 335 Query 136776 -TGGGAACAGCTTTT 136789 ||| ||||| |||| Sbjct 336 CTGGCAACAGTTTTT 350 >seq248709 Length=359 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct 132 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGCTACCCGT 190 >seq38716 Length=331 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 || |||||||||||||||||||||||| ||||||||||||| |||||||| | |||||| Sbjct 77 TACCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTTACGGGTTCAACCCCCGT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 585829196940600