Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_014899.1 Length=35203 Score E Sequences producing significant alignments: (Bits) Value seq213072 140 7e-29 seq272266 123 6e-24 >seq213072 Length=511 Score = 140 bits (154), Expect = 7e-29 Identities = 171/228 (75%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 6483 TGTCGAGTTTGGTGGCGAAGGAGCCGTAGAGGGAATTGCTGAGCAGTTTGGCGATGGAGC 6542 |||| || |||||||| || || |||||||||| ||| |||| ||||||||||||| Sbjct 287 TGTCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGC 346 Query 6543 GCATCGTTTGGtttttttCGCGGTCGGCCTGCTCCTTGGCCTGGATGTTGAGGGTGACGT 6602 ||| |||||| ||||| |||| ||||| ||||||||||| |||||| || |||| Sbjct 347 GCAGGGTTTGG-TTTTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGT 405 Query 6603 AGGAGCGGGCCACGCA-GGCCGTCTCGGGAAAAATGGTGGAGCGGGCGTCGTCGAGGACG 6661 | ||| || ||||| ||| | ||||| || | ||||| ||| ||||| | | | Sbjct 406 ATTCGCGCGCAACGCACCGCCAT-TCGGG-AAGACGGTGGTGCGCTCGTCGGGCACCAGG 463 Query 6662 CGCACCTTCCAACCGCGGTTGTGGAGGGTGACGATGTCGATGGTGGTG 6709 |||| ||||||||||||||| |||||||| | ||| | | ||||| Sbjct 464 TGCACGCGCCAACCGCGGTTGTGCAGGGTGACAAGGTCAACGCTGGTG 511 >seq272266 Length=497 Score = 123 bits (136), Expect = 6e-24 Identities = 182/255 (71%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 6947 GGATGAGTGAGGGCGCTGGCGTACATGCCGCAGATGTCGTACACGAAGATGGGTTCTTCG 7006 || || ||||| ||| ||||||||||||||| |||||||| ||| || ||| ||| | Sbjct 241 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACG-TGAGGGGCTCTCTG 299 Query 7007 AGGACGCCCAAAAAGGTCGGATAGCAGCGTCCGCCGCGGATGCTGAGTCTGACGTAGTCG 7066 || | || | | | || || ||||| | ||| |||||||||||| | ||||| ||| Sbjct 300 AGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCG 359 Query 7067 TACATCTGGTGCGAGGGGGCCAGAAGGCGGTGGTGGAAGGTGGGCCGACGGATTTGGGTT 7126 || | | ||||||||| || || ||| | | || | || || | || | Sbjct 360 TATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCT 419 Query 7127 TCTCGGTACCAGACCTGTCGGAAGATGGCGTGTGAGTTGGAAGAGATGGTGGGCCGCTGG 7186 ||||| | | | ||| | ||||||||| ||||||||||| || ||||| || |||||| Sbjct 420 GCTCGGAAGC-TATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTGG 478 Query 7187 AAGACGTTAAAGTTG 7201 |||||||| ||| || Sbjct 479 AAGACGTTGAAGCTG 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111956842122710