Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq742 127 5e-24 >seq742 Length=2242023 Score = 127 bits (140), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| ||||| || || ||||| || | || || | ||||||||| Sbjct 1675267 ACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1675208 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || | || || ||||| ||||||||||| ||||| || Sbjct 1675207 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 1675148 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || || || || || |||||||| ||| ||||| |||||||| | ||| Sbjct 1675147 ATCTTAGCTTTAACATTTTCTATGGTGTC---ACTGGGCTCCACCTCAAGGGTGATGGTC 1675091 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| ||||| || || | ||||| Sbjct 1675090 TTGCCAGTCAGGGTTTTGACAAAGATCTGCAT 1675059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1103405625604509