Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_015932.1 Length=31616 Score E Sequences producing significant alignments: (Bits) Value seq272266 158 2e-34 seq213072 84.2 4e-12 >seq272266 Length=497 Score = 158 bits (174), Expect = 2e-34 Identities = 333/491 (68%), Gaps = 17/491 (3%) Strand=Plus/Plus Query 5912 TCCCCCCGGAGGGGCTCGTTGGTCCAGCATAGCCTTCCGCCTTTTCTGGAACAAAATGGC 5971 || || || ||| |||||||||||||||| || | ||||| || | || || |||||| Sbjct 7 TCTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGC 66 Query 5972 GGCAGGACGTCAAGATGGCTGTCTTCAGGGGGGTCGGCGTCGATGGTGAAAATGGCGGGC 6031 || ||| ||| || || | || || |||||||| ||||| | ||| || | ||||| Sbjct 67 GGTAGGGGGTCTAGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGC 126 Query 6032 AGCAGCTCCGCGTCAAAATAA-CTAATTTGGGGACACTGTTGCA--TCTTGAGCT----- 6083 ||||| |||||| || || ||| ||| || ||||| ||| | || Sbjct 127 AGCAGGCGCGCGTCGAAGTAGTCTATCTTG----CATCCTTGCAAGTCTAGCGCCTGCTG 182 Query 6084 -CATACGCCCGCATGGCCAGGGCCCTCTCATAGGGGTTGAGAGGGGCGCCGGCGGGAAAC 6142 ||| ||| || ||| || || | ||| || |||||||| |||| || || | Sbjct 183 CCATGCGCGGGC--GGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATG 240 Query 6143 GGATGGGTGAGGGCGCTCGCATACATGCCACAGATGTCATAAACAAACACGGGTTCTGCT 6202 || |||||||| ||| || |||||||| || ||||| ||||| | ||| ||| Sbjct 241 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACGTG-AGGGGCTCTCTG 299 Query 6203 AGAACGCCTATGTAAGTGGGGTAGCAGCGCCCCCCGCGGATGCTGGCGCGCACGTACTCA 6262 || | || | || || |||||||| | || ||||||||||||||||||||||| || Sbjct 300 AGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCG 359 Query 6263 TACATCTCATTGGAGGGGGCCAGCAGGATGGTATTAAAATGACCCTGTCCGGGCTGTTCC 6322 || | || | ||||| || || ||| || | | | | | ||||||| || Sbjct 360 TATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCT 419 Query 6323 GCTCTGTACAATATTTGTTTAAAAATGGCGTGAGAGTTTGAGCTGATGGTGGGCCGCTGG 6382 |||| | | ||| || | || ||||| || ||||| || ||||| || |||||| Sbjct 420 GCTC-GGAAGCTATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTGG 478 Query 6383 AACACGTTGAA 6393 || |||||||| Sbjct 479 AAGACGTTGAA 489 >seq213072 Length=511 Score = 84.2 bits (92), Expect = 4e-12 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 5648 TCAATTTGGTCAGAAAACACCGtttttttGTTGTCTAACTTGGTTGCAAATGAACCGTAG 5707 || || ||||||||||| | | ||||||| ||| | |||||| ||||| || |||||| Sbjct 258 TCCATCTGGTCAGAAAAG-CAATCTTTTTGT-GTCAAGCTTGGTGGCAAACGACCCGTAG 315 Query 5708 AGGGCGTTGGATAAAAGCTTGGCGATGCTTCGCATGGTTTGGT 5750 ||||||||||| | | |||||||||| |||| |||||||| Sbjct 316 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100536702987372