Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1508 107 2e-18 >seq1508 Length=1569309 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 ||||||||||||| |||| ||||| || | | ||||||||||| ||||| || | Sbjct 108330 CCTCGTCTCTACTAATCAGCTCATTGGAGTGGGCCAGGCCAGGCATCAGCCCTCTCTTCT 108271 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 ||| |||||| || |||||||| || || || ||||| || ||||| ||||||||||||| Sbjct 108270 TTAGCCAGAAGATGGAAGCAAAGGAACCCGAGAAGAAAATGCCTTCAACTGCTGCAAAAG 108211 Query 19103 CAAC 19106 | || Sbjct 108210 CGAC 108207 Score = 86.0 bits (94), Expect = 7e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 19461 TACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACG 19520 ||| || ||||||||||| |||||||||| ||| | |||||||| ||||| || ||| | Sbjct 105884 TACCTCCTCAACTGTCCAGAAAGAAGCCTGTGCCTGCTTATACATCTTCCAAATGTCAGG 105825 Query 19521 ATATTGTATAGGAAATATAACAAATCT 19547 |||||| || || || || |||||||| Sbjct 105824 ATATTGGATTGGGAAAATTACAAATCT 105798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559105544024280