Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq300558 735 0.0 seq266300 282 1e-71 >seq300558 Length=1001 Score = 735 bits (814), Expect = 0.0 Identities = 422/432 (98%), Gaps = 0/432 (0%) Strand=Plus/Minus Query 22410 TCAATGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCGGCCTAATCCAAAC 22469 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 432 TCGATGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCTGCCTAATCCAAAC 373 Query 22470 TCTTTACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGATTA 22529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 372 TCTTTACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGGTTA 313 Query 22530 GGGGGTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAG 22589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 312 GGGGGTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAG 253 Query 22590 GCTACCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTC 22649 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 GCCACCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTC 193 Query 22650 TCTTCCATCCTTAACCGGAGGTGGGAATATCCTGCACTCGCGTACCCATCGACGAACTGT 22709 |||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct 192 TCTTCCATCCTTAACCGGAGGTGGGAATATCCTGCATTCCCGAACCCATCGACGAACTGT 133 Query 22710 TTCAAGGCTTCTTGGGCGTCGCTGGCGAGCGTTCCACTCCTGAAGTGTCAAGTACATCGC 22769 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 132 TTCAAGGCTTCTTGGACGTCGCTGGCGTGCGTTCCACTCCTGAAGTGTCAAGTACATCGC 73 Query 22770 AAAGTCTCCGCAATTACACGCAAGAAAAAACCGCCATCAGGCGGTTTGGTGTTCTTTCAG 22829 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 72 AAAGTCTCCGCAATTACACGCAAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAG 13 Query 22830 TTCTTCAATTCG 22841 |||||||||||| Sbjct 12 TTCTTCAATTCG 1 >seq266300 Length=503 Score = 282 bits (312), Expect = 1e-71 Identities = 161/164 (98%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 30668 CCAAACGTCTCTTCAGGCCACTGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCA 30727 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 169 CCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCA 110 Query 30728 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCACTATCC 30787 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 109 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 50 Query 30788 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGC 30831 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 49 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGC 6 Score = 105 bits (116), Expect = 2e-18 Identities = 63/66 (95%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 22840 CGAATATTGGTTACGTCTGCATGTGCTATCTGCGCCCACAGCATCCAGTGGTCATAGCAG 22899 |||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| Sbjct 503 CGAATATTGGTTACGTCTGCATGTGCTATCTGCGCCCATATCATCCAGTGGTCGTAGCAG 444 Query 22900 TCGTTG 22905 |||||| Sbjct 443 TCGTTG 438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131903084576820