Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_022613.1 Length=43686 Score E Sequences producing significant alignments: (Bits) Value seq213072 82.4 2e-11 >seq213072 Length=511 Score = 82.4 bits (90), Expect = 2e-11 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 8568 GTGTCCATGTTGGTGGCGAATGCTCCGTACAGGGCATTGCTTAGCATTTTGGAGATGGAG 8627 ||||| | |||||||| || | ||||| ||||| ||| |||| |||| ||||||| Sbjct 286 GTGTCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAG 345 Query 8628 CGCATCACCTCGtttttttCGCGATCAGCTTTTTCCTTGGCGAGGATGTTTTTCGTGACG 8687 |||| | | ||||| ||||||| || |||||||| ||||||| | ||| Sbjct 346 CGCA-GGGTTTGGTTTTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACG 404 Query 8688 TAATCGGCGCACAACG-TTTTCCATTCCGGGAAAACGATGTTCATCTCGTCATGGAGAAC 8746 || || |||| ||||| ||||| |||||| ||| || | |||||| | | | Sbjct 405 TATTC-GCGCGCAACGCACCGCCATT-CGGGAAGACGGTGGTGCGCTCGTCGGGCACCAG 462 Query 8747 TTGAACACGCCATCCTCTGTTGTGCAACGTGAGAATGTCGACG 8789 || || ||||| || | |||||||| |||| || ||| ||| Sbjct 463 GTGCACGCGCCAACCGCGGTTGTGCAGGGTGACAAGGTCAACG 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138964659319552