Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq5353 163 2e-34 >seq5353 Length=2895058 Score = 163 bits (180), Expect = 2e-34 Identities = 916/1457 (63%), Gaps = 12/1457 (1%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| || || ||||| || ||||| || | ||||| || || || | ||||| ||| Sbjct 2260522 GCAGATACGTTCAGAATGCCGTTGGCGTCAATGTCAAAGGTCACCTCCACCTGAGGCACC 2260581 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || ||| | ||||| ||||| || || | ||| | || || || || |||||| Sbjct 2260582 CCCCTCGGTGCAGGGGGGATGCCAGTCAGGTCAAACTTCCCGAGGAGGTTGTTGTCTTTA 2260641 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | | || ||||| | | |||| ||| | | || || || || || Sbjct 2260642 GTCATGGCCCTCTCGCCCTCATACACCTGGACCAGAACCCCCGGCTGGTTGTCAGAGTAC 2260701 Query 281606 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || | || || |||| | | || || || || ||||| | | || | | ||| Sbjct 2260702 GTGGAGAAGAC-CTGGGTCTGCTTGGTGGGGATGGTGGTGTTACGCTTGATGAGAGTGGC 2260760 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||||| ||||| || ||||||| || || || || |||| || |||| |||| | Sbjct 2260761 CATAACCCCACCGGCGGTTTCTATGCCCAGGGACAGGGGAGCCACGTCAAGCAGGAGCAA 2260820 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 281784 | || | ||| | ||| | || | || ||||| || || | || || ||||| Sbjct 2260821 GTCCTGGACATTTCCCGAAGTGTCCCCCATGAGGATAGCCGCCTGGACCGCGGCCCCATA 2260880 Query 281785 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TG 281843 || || || ||||| || || | | | || |||| | | || ||||| |||| || Sbjct 2260881 GGCCACGGCCTCATCCGGGTTGATGCTCTTGTTCAGTTCTCTGCCGTTGAAGAAATCCTG 2260940 Query 281844 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 281903 |||| || | | |||||| || | | || || || || | |||||||| || | Sbjct 2260941 CAAGAGCTTCTGG-ATCTTAGGGATTCTGGTGGAGCCGCCGACAAGGACAATTTCCTGGA 2260999 Query 281904 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTC 281963 ||| || || || || | || | ||| || || || || || | | Sbjct 2261000 TCTGCCCCTTTTCTAGCTTGGCGTCACGCAGGGATTTCTCCACCGGATCCAGCGTTCCCC 2261059 Query 281964 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAA 282023 | || | || || || || ||||| || || |||| | | | | | |||| Sbjct 2261060 TGAAGAGCTCAGAGTTGAGCTCCTCGAAGCGGGCCCTTGTAATGGAGGTGTAAAAGTCAA 2261119 Query 282024 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTT 282083 | ||||| || | ||| || | ||| || | | || | ||| || | | | | Sbjct 2261120 TGCCTTCAAAGAGAGAGTCGATTTCGATGCTTGCCTGCGAGCTAGAGGACAAGGTTCTCT 2261179 Query 282084 TAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAATC 282141 | || | ||||||||| || | || | || | ||| | || ||| | | | || Sbjct 2261180 TGGCTCTTTCACATGCAGTACGAAGCCGTCTCACTGCTCT--CTTATTTTGGCTGATGTC 2261237 Query 282142 TGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAA 282199 | || | |||||||||||| ||||| ||| | |||| || | || || ||||| Sbjct 2261238 CTTCTTGTGTTTTCTCTTGAATTCTTCGACAAAG--TGTTGCACCATGCGGTTGTCAAAG 2261295 Query 282200 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 282259 || || || |||| | || | ||||| || | |||| | ||| | ||||| ||| Sbjct 2261296 TCCTCCCCGCCCAGATGCGTGTCTCCTGCGGTGGACTTTACCTCGAAGATGCCATCCTCA 2261355 Query 282260 AGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 282319 | | | | | || || ||| || ||||||| ||||| || || ||||| | Sbjct 2261356 ATGGTGAGGACGGACACGTCGAAGGTACCTCCACCCAGGTCAAAGATTAGGACATTTCTC 2261415 Query 282320 TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 282379 |||| | || | ||| ||||||||||| || | ||| || || || || ||||| || Sbjct 2261416 TCTTCTTTTTTGGCTTTGTCAAGACCATAGGCGATAGCCGCTGCTGTCGGCTCATTGATG 2261475 Query 282380 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 282439 || | | ||||| || || | ||| || ||||| || || ||||| || || || Sbjct 2261476 ATCCGTAGCACATTCAGGCCTGAAATAACCCCGGCATCCTTGGTAGCTTGCCTCTGGGAG 2261535 Query 282440 TCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCG 282499 || ||||| || || || || || || || |||| | || || || | || || Sbjct 2261536 TCATTAAAGTAAGCTGGGACGGTGATGACTGCATTAGACACCCGTTGCCCCAAGTAGGCC 2261595 Query 282500 CTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGC 282559 ||| | | |||||||| | || ||| || || || | |||||| | | | | Sbjct 2261596 TCAGCTATCTCCTTCATTTTGACCAGAACCATAGAGGAGATCTCTTCTGGGAAGAAATCC 2261655 Query 282560 TTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTA 282619 |||| || | || |||| | | || || | | | || || || Sbjct 2261656 TTGGTCTCCCCCTTGTACTCCACTTGGACTTTGGGCTTTCCGTTATCGCTGATGACCTTG 2261715 Query 282620 AATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAAT 282679 || ||||| ||||| || | || ||| ||||||||| ||| | |||||||||||| Sbjct 2261716 AAAGGCCACAGCTTCATGTCAGCCTGCACAATTTGGTCATCAAACTTTCTACCAATTAAG 2261775 Query 282680 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCT 282739 || || ||||| || || || |||| || || | || | || | ||| || |||||| Sbjct 2261776 CGCTTGGCATCGAAGATTGTGTTGGAAGGGTTCATGGCCACCTGGTTTTTCGCAGCATCT 2261835 Query 282740 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 282799 ||||| || |||| || | || | ||||| || || ||||| || || || Sbjct 2261836 CCAATGAGCCTCTCTGAATCGTTGAAAGCCACATAGCTCGGTGTGGTGCGGTTTCCCTGG 2261895 Query 282800 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTT 282859 ||||| || ||||| || ||||| |||| || ||||||| ||||| | || || Sbjct 2261896 TCATTTGCGATAATCTCCACTTTGCCATGCTGGAATACACCCACACAGGAGTAGGTGGTG 2261955 Query 282860 CCTAAATCAATACCAAT 282876 || |||||||| || || Sbjct 2261956 CCCAAATCAATGCCTAT 2261972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3719645540606502